| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0269 |
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| Symbol | |
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| ID | 3961171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 273660 |
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| End bp | 274793 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915104 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_521557 |
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| Protein GI | 89899086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.556277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTT TCAAAACCCT CATCGCCACC GCCGCTGCGG CTCTGGTCAC TGGCTCGGCG
CTGGCCGACA TCACCATCGG CATCAGCCTG CCTTTGAGCG GCCCGGCATC AGGCCTGGGC
ATTCCGATGG GCAACCAGAT CAAGCTCTGG CCTACATCCA TCGCCGGAGA AAAACTCAAG
GTCATCGTGC TGGACGATGC CACCGATCCG ACCAACGGCG TCAAGAACGC CAAACGTTTT
GTGACCGAAG ACAAGGCCGA CATCATCATG GGCTCAGCCG CCACACCGGT GGCCATCCCG
ATGGCCGCCG TGGCCGCTGA AGCCGAAACC GTGCAGATAG CGTTCTCCCC CGCCGTACTG
CCCCCCGGCA AAGATGCCTG GACCTTTCGT CTGCCGCAAT CGAACGATGT GATGGCCCAC
GCCATGGTGG CGTTGATGAA AAAGCAAGGT GTCAAAACCG TGGGCTTTCT GGGCTACACC
GATGCCTATG GCGAAAGCTG GCTCAAGGAG TTCACCGCTC AAGCCAATGC CAACGGCATC
AAGCTGATTG GCACCGAGCG TTTTGCCCGC TCTGACACCA GCGTCACCGC CCAGGCCCTC
AAGCTGGTGG CCGCCAACCC GGACGCCATG TTGATTGTGG CCTCGGGCAG CGGCGCTGCC
ATGCCCCACA TGGCGGTGGT GGATCGTGGC TACAAGGGCA AGATCTACCA GACCCATGCA
GCAGCGTCGC GTGACCTGAT GCGTGTCGGT GGCAAAGCCG TGGAAGGTGC TTATGTGGTG
TCCGGCCCGG CGGTAATTGC CGAGCAGTTG CCCGACAGCC ACCCGTCCAA GAAAGTTGCC
ATCGACTTCG TGCAGCAATA CGAAAAGGCC TATGGCCCGG GGTCACGCAA CCAGTTCGCC
GGCCACAGTT ACGACGCGGT GCTGATACTG GAAAAAGTCG TTCCCGTGGC GCTGAAAAAA
GGCAAACCCG GCACCAAGGA ATTCCGCGCC GCCCTGCGTG ACGCCATGGA AACCATGGGC
CGCACCGTGG TGTCGCATGG CGTGCTGAAC TGGACCCATG ACAACCACTG GGGCTTCACC
AACGAAACCG GTGTGATGCT CAAGGTGGTC AACGGCGACT GGAAGGTCGA GTAA
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| Protein sequence | MKAFKTLIAT AAAALVTGSA LADITIGISL PLSGPASGLG IPMGNQIKLW PTSIAGEKLK
VIVLDDATDP TNGVKNAKRF VTEDKADIIM GSAATPVAIP MAAVAAEAET VQIAFSPAVL
PPGKDAWTFR LPQSNDVMAH AMVALMKKQG VKTVGFLGYT DAYGESWLKE FTAQANANGI
KLIGTERFAR SDTSVTAQAL KLVAANPDAM LIVASGSGAA MPHMAVVDRG YKGKIYQTHA
AASRDLMRVG GKAVEGAYVV SGPAVIAEQL PDSHPSKKVA IDFVQQYEKA YGPGSRNQFA
GHSYDAVLIL EKVVPVALKK GKPGTKEFRA ALRDAMETMG RTVVSHGVLN WTHDNHWGFT
NETGVMLKVV NGDWKVE
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