Gene Rfer_0261 details

Gene Information

• Locus tag: Rfer_0261
• ID: 3961163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 260475
• End bp: 263909
• Gene Length: 3435 bp
• Protein Length: 1144 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637915096
• Product: hypothetical protein
• Protein accession: YP_521549
• Protein GI: 89899078

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGAC AGAGCTTGCA GTGGACAAAC ATTCGGTGGA AGCGGTGGGT GGCGGGCGCG 
GCGGGCCTGC TTGCTGCCTA TACGGTGGCC GGGTTTTGGC TGGTTCCGCC GCTGATCAAG 
CATCAGGTCC CCCAGTTTGG GCAGACCGAA CTGGCGCGCC AGGCGACGAT CGGCGAGGTT 
CGTTTCAATC CCTTCACTTT GCGCCTGGAG GCGCAGGATT TGCGCCTGGC CGAGGCCGAT 
GGCACGCCGC TGTTCGCGGT CGGCAAACTC GCCGTGGCAC TGCAATGGAA ATCCCTGATC 
CGGCGTGCCT GGAGTTTTTC CGACATCCGC ATCACCGCAC CGAGCGCGAA CCTGGCGATC 
GCGCCCGACG GCAAATTCAA TCTCGCCGAG CTGCTGGCCA CGCTTGAGCG TCGACCGCAC 
GAAGCGTCCA CCGACGCCAG CCTGCCACGC GTGATCGTCG AGCAACTCGC GCTGGAACAG 
GGCACGGTGG ACATGCACGA CCGGCGGGCC GGTTACGACA ACACCTTTGC GCCGATCGAT 
TTTTCGCTGA GCAATTTCAG CACCTTGCCG GAGCAGAACG ACGCCCATAC TTTCACGGCC 
CAGTCCGCGC GCGGCGGCAA GATGCGCTGG AAGGGCACTG CGTCGGTGAA CCCGATCCGC 
GCCAGCGGCG AAGTGACCCT CGAAAACGCC TCGCTGCCGG AGCTGGCGGT TTATCTCAAG 
TCGTACACCC GTGCAAGGGT GGCAGCCGGG CAGCTTTCCG CCACCTTGCC GTACAGCCTG 
TCCTACGCGG ACGGCAAGTT TGAAGCCAGC CTGGAAGGCG CCAAGGTGTC GCTGCGCGAT 
CTGGCGCTGG CGCGCGAAGG CGTTACCGAT TCCTTCGCCG CGCTGACGCG CCTGGACATC 
AACGACGTCA ACGCCGATCT GGCACGCCGG CAGGTGACGG TGGGCGAGGT GCGCGCCGAC 
GGCGGCAAGC TCAGTGTCAA ACGCGACGCC AAGGGCGAAC TCGATCTGAC GAACCTCATG 
ATCGCCAGCG CGGGTCCGGC GGCCTCGGGG CCGGCTGCCG CGGTGGCTGT CAACAACTGG 
AAGCTGGCGG TCAAGCAAGT GCTATTCGAT CAGATGGCGG TCAGCGCGGT GGACGAAACG 
GCCAAACCAC CGCTGAAGTT GAACGCGGGC AAAGTGCGGC TGCAGCTGCA AGTTGCCGCC 
GAGCAGGCAG GCGCCAACTT CCAGCTGAAG CTCTCGCAGG CTGCCCTTTC ACTCGCTGGC 
CTGACGCTGG CCAGCGGGGC GCAAGCGCCG TTCAAGCTGG CGCAGCTGGG TTTCTCGGAC 
GGCATGCTTG ACCTCGCTGC CCGGCAGGCC AGCATCGGGC GCCTCTATGC CGAGGGCGGG 
CAACTGCAGC TCGTGCGCGC ACGGGACGGA AAACTCAATC TCATGGAGTT ATTGCCCCGA 
TCCAGCGCGA TCGGACCGCA GGCTGCGGCG GCAGCCGGCA AGCCATGGGT CGCCGTGGCC 
AAGACCGTGG AATTAAGCAA GTTCGGCGCC GATGTTGCGG ATGAGGGCGC CGGCGTCAAG 
GTTCAGGTCA CCGACCTTGC GCTGAAACTC GAAGGCGCCA GCAGCGATCT CAAGCAGACG 
GTCAAGTTCA ACACCGACCT GAAGCTGCGC GAAGGGGGGC AGTTCACGGC ACAAGGCAGC 
GTGGTCCCGG CCAACGGTGA AGTGCAGGCC GATGTGCGTC TCAAGCAGCT CGCGCTGGCG 
CCCTTGCAGC CCCTCCTGGC CCACTATCTG AAGTTGAAAA TCGCCCGCGG CAATGTCTCC 
GCGCAAGGGC TGCTCACCAC CGGCGCGGGC ACAGCCAAGA GCCCGAGCCT GCGTTACGTC 
GGCGCGCTCA ACGTTGCCGG GCTGACGCTC AACGAGGAGG ACGGTGGCCT GTTCGCCGCG 
TGGAAGAACG CCAGCGCCGA CAAGTTCACG GCCAGCCTCA ACCCCAACCG GCTCGACGTC 
CCGGAATTGC GTATCGTCGA GCCCAACGCC ACGCTGATCA TCGAAGACGA TCGCAGCTTC 
AATGCGGCCC GCTTGCTGGT GCAGCCCAAT GCAGGCGCAA AAGTCGAGGT GCCGACTCAG 
GCCAAGGCTA AGGCCGACGA CGACCCGTTC CCGGTTCGAA TCCGGCGCCT GCGCCTGCAG 
AACGCCAAGC TGGACTTCAC CGATCTCAGT TTGCGGCCGC AGTTCAGCGC CAAGATCTAC 
GAGCTCAACG GCGTGATCAA CGGACTCTCG TCGAACCGCG AGGCGCGCAG CCAGATCGAG 
CTTGACGGCC GAGTCGACGA GTTCGGCCTG GCGCGCATCC GCGGCGAGCT CAACCCGTTC 
GCGCCGCGCA ACAACACCGA CATCAACGTC GTGTTCAAGA ATGTCGACAT GGTGCCGGCC 
TCACCCTACA GCATGAAGTT CGCCGGCTAC AAGGTCGCCG AGGGCAAGAT TTCGCTGGAC 
CTGCAATACA AAATACGCGA CAGCCAGCTG GAAGGCGCCA ACCAGATCGT CATCGACAAA 
CTGACCCTGG GCGAGCGGGT CGACAGCCCC GATGCGCTCA AGCTGCCGCT GCAACTGGCA 
ATCGCCATCC TCAAGGACAG CGAGGGCCGC ATCGACCTCG GCCTGCCAAT CTCGGGCAAC 
CTCAGTGACC CGCAGTTCAG CTACGGCGCC ATCATCTGGA AGGCCATCGG GAACCTGCTG 
ACCAGGATCG TCACCGCGCC GTTCCGCGCG TTGGGCAGCC TGCTGGGCGT CAGCGGCGAG 
AAGCTGGAGT CGATCGACTT CGATGCCGGC AGCGACAGGC TGCTGCCCCC GGAGCGCGAA 
AAGCTCAAGC AGGTGGCTCA GATTCTGGGC AAGCGCGCGC AACTGAAACT CTCGGTGCCC 
GCACAGTACA GCGAAACAGC CGATGGCGCC GCCTTGCGGG CGGGCGCAGT GCGGGTCGAG 
ATCGCCCGCC GTGCCGGCAT CAAGCTCCAG GCAGGCGAAG AGCCCGGTCC GTTGAACCTG 
AGCGATCGCG CGGTGCGCGG CGCGATGCGC GACCTGTATG CCGAGCGCTT CGGCGAGGCG 
GAACTCGACA AGCAGAAAAA GGCAGCGGAA GGCGGCGGCG CTCCCGCTGC TGCGGCGAGT 
ATGCCGGACA CCAAGACCGC AGCGGCCCAG GCGAAATTGC CGCTCTGGCA GCGCGTCGGC 
AAGATGATCC AGGGCGAACC GCAGGTGGCC GATGCCAGTG CCTTCTACAA CCAGTTGCAG 
GAGCGCCTGA ACCAGAACCA GCCGCTGGCC GCCGATGCCC TGGCCAAGCT GGGTGCGCAG 
CGAGCCGAAG CGATTCTGGC AGCGCTCAAG GAAGCCGGCG TCGACCCCGC CCGCGCCGAC 
GCGGCGGCGC CTGAGAAGGT CGAATCCGAC ATTGGCAAGC CGGTGCCGCT CAAACTGGGG 
CTGGTGGCGA AGTAA 

 

Protein sequence

MARQSLQWTN IRWKRWVAGA AGLLAAYTVA GFWLVPPLIK HQVPQFGQTE LARQATIGEV 
RFNPFTLRLE AQDLRLAEAD GTPLFAVGKL AVALQWKSLI RRAWSFSDIR ITAPSANLAI 
APDGKFNLAE LLATLERRPH EASTDASLPR VIVEQLALEQ GTVDMHDRRA GYDNTFAPID 
FSLSNFSTLP EQNDAHTFTA QSARGGKMRW KGTASVNPIR ASGEVTLENA SLPELAVYLK 
SYTRARVAAG QLSATLPYSL SYADGKFEAS LEGAKVSLRD LALAREGVTD SFAALTRLDI 
NDVNADLARR QVTVGEVRAD GGKLSVKRDA KGELDLTNLM IASAGPAASG PAAAVAVNNW 
KLAVKQVLFD QMAVSAVDET AKPPLKLNAG KVRLQLQVAA EQAGANFQLK LSQAALSLAG 
LTLASGAQAP FKLAQLGFSD GMLDLAARQA SIGRLYAEGG QLQLVRARDG KLNLMELLPR 
SSAIGPQAAA AAGKPWVAVA KTVELSKFGA DVADEGAGVK VQVTDLALKL EGASSDLKQT 
VKFNTDLKLR EGGQFTAQGS VVPANGEVQA DVRLKQLALA PLQPLLAHYL KLKIARGNVS 
AQGLLTTGAG TAKSPSLRYV GALNVAGLTL NEEDGGLFAA WKNASADKFT ASLNPNRLDV 
PELRIVEPNA TLIIEDDRSF NAARLLVQPN AGAKVEVPTQ AKAKADDDPF PVRIRRLRLQ 
NAKLDFTDLS LRPQFSAKIY ELNGVINGLS SNREARSQIE LDGRVDEFGL ARIRGELNPF 
APRNNTDINV VFKNVDMVPA SPYSMKFAGY KVAEGKISLD LQYKIRDSQL EGANQIVIDK 
LTLGERVDSP DALKLPLQLA IAILKDSEGR IDLGLPISGN LSDPQFSYGA IIWKAIGNLL 
TRIVTAPFRA LGSLLGVSGE KLESIDFDAG SDRLLPPERE KLKQVAQILG KRAQLKLSVP 
AQYSETADGA ALRAGAVRVE IARRAGIKLQ AGEEPGPLNL SDRAVRGAMR DLYAERFGEA 
ELDKQKKAAE GGGAPAAAAS MPDTKTAAAQ AKLPLWQRVG KMIQGEPQVA DASAFYNQLQ 
ERLNQNQPLA ADALAKLGAQ RAEAILAALK EAGVDPARAD AAAPEKVESD IGKPVPLKLG 
LVAK