Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0256 |
Symbol | |
ID | 3961158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 253580 |
End bp | 254734 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637915091 |
Product | NHL repeat-containing protein |
Protein accession | YP_521544 |
Protein GI | 89899073 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAACT CATCAACGAC CATGTTCCTG CCTACTCGAC TACGATTTTT CAGTGCACTG CTCGGCGCGC TTATGCTGCT GTCCGGCTGC GTCACGCAGC CTACCAAAGC ACCGCTGCAA AAAGAGGCCG TGTTCTACCC GCGAGCGCCG GATGCGCCGC GCGTGCAGCA TCTGGCCACT TTTGCCAGCG CGCGCGATCT GGAAACCGCC AAAGAAAGTG GTGGGCTCAA GGATTTTCTG CTCGGCGAAG AAAAAGTCGA GGACGCCTTG GTGCGTCCTT ACGGCGTGGC GATGTCCGAT AGCAAGATCT ACGTCGCCGA TAGTCGAGGC CCCGGCTTGG CGGTTTTTGA CCTCAAAACC AGAAAATTTT CACTCATGTC GGGGTCGGGT GCTGGACGCA TGCAGCGCCC CATCAATGTA GCCATCGACG CAGACGATAC CAAGTACGTG ACTGACACCG CGCGTAATCA GGTACTGGTC TATGACAAGG GCGACCGTTA TCTTGCAGCC TATGGCGGCA AGGATGAGTT CAAGCCGGTC GATGTCGCGA TTGCCGGCGA TCGGCTGTAT GTGGTGGACA TCGAGCACCA TGAAGTCCAG GTGCTGGACA AGCGATCGGG GAAACTACAG TTCAAATTTG GCAAGTCCGA TGTTGATAAA GAGAAGTCAT TGCATCAACC GACCAATCTT GCCGTTGGCC GCGACGGGGA CATCTATGTT GTCGAAACCG GAAACTTCCG CGTTGCGCGT TTCACGCCCG AGGGTAAGTT CGTGCGCCAT TACGGCGAAG CGGGTCAGGC GCCGGGGCAG TTTGCACGGC CCAAGGGGAT CGCGATGGAC CGCTCCGGTC GCATGTACGT CAGCGATGCG GCATTCCAGA ATGTGCAGAT CTTCGACGGT CAGGGGCGTG TGCTCATGGC TTTCGGGCAG CCAGGGGGGG ATTTGCCCGG TCTCAACCTG CCAGCAGGTG TTGCCATCGA TTACGACAAC GTGGCGCTGT TTCGCAGCCT CGCAGACCCC AAATTTTCCA TCGAGCACCT GATTCTGGTC GTGAGTCAAT TTGGGCCCAA CCAGGTTGAC GTCTTCGGTT TCGGAAAAAT GGCCGGTGTT GACTATCCCC AGGACGAGAA GCTCGAATCC AAACCGGTCC CGTGA
|
Protein sequence | MPNSSTTMFL PTRLRFFSAL LGALMLLSGC VTQPTKAPLQ KEAVFYPRAP DAPRVQHLAT FASARDLETA KESGGLKDFL LGEEKVEDAL VRPYGVAMSD SKIYVADSRG PGLAVFDLKT RKFSLMSGSG AGRMQRPINV AIDADDTKYV TDTARNQVLV YDKGDRYLAA YGGKDEFKPV DVAIAGDRLY VVDIEHHEVQ VLDKRSGKLQ FKFGKSDVDK EKSLHQPTNL AVGRDGDIYV VETGNFRVAR FTPEGKFVRH YGEAGQAPGQ FARPKGIAMD RSGRMYVSDA AFQNVQIFDG QGRVLMAFGQ PGGDLPGLNL PAGVAIDYDN VALFRSLADP KFSIEHLILV VSQFGPNQVD VFGFGKMAGV DYPQDEKLES KPVP
|
| |