| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0239 |
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| Symbol | |
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| ID | 3962297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 236787 |
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| End bp | 237512 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637915074 |
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| Product | ABC transporter related |
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| Protein accession | YP_521527 |
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| Protein GI | 89899056 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAGT TCAACGAGCT CAACAAATGG TACGGCGCGC ATCACGTTCT GCAAAACATC
AATCTTGAGG TTGCCAAAGG AGAAGTCGTG GTCGTTTGCG GGCCGAGCGG GTCTGGGAAA
AGCACTCTCA TCCGTTGTGT CAACGGCCTG GAGAAATTTC AAAGCGGCAC TTTGATCGTC
GATGGCCTGA GCGTCGCCAA CGAGGCAAAT CTGAGGCAGC TTCGGATGGA ACTGGGCTTT
GTCTTCCAGC AATTCAATTT ATATCCCCAC AAGACAGCAC TTGAAAATGT GACACTTGCG
CCGATACATG TTCGAAAGTT ACCCAGGAAA GAAGCCATCA GCCGCGGGCG CGAGATATTG
GAAAAAGTCG GTTTGGGCGA CAAATTCGAT GCTTACCCCC AGCAGTTGTC GGGGGGGCAA
CAACAACGGG TCGCCATCGC CCGCAGCCTG TGCATGCAAC CCAAGGTCAT GCTTTTTGAC
GAGCCGACCT CCGCGCTTGA TCCCGAAATG ATCAACGAGG TTCTGGATGT GATGGTGTCC
CTGGCGAAAG ACGGTATGAC GATGATTGTT GTCACGCACG AAATGGGTTT TGCCCGCAAG
GTGGCCGATC GCGTGGTGTT CATCGACAAG GGTGTCATTG TTGAAGTTGC CGAACCCGAG
GCCTTTTTCA CTGCGCCAAA GAATGAGCGA ACGCGTGAAT TCCTGGGGAA GATTCTTCAG
CATTAG
|
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| Protein sequence | MIKFNELNKW YGAHHVLQNI NLEVAKGEVV VVCGPSGSGK STLIRCVNGL EKFQSGTLIV
DGLSVANEAN LRQLRMELGF VFQQFNLYPH KTALENVTLA PIHVRKLPRK EAISRGREIL
EKVGLGDKFD AYPQQLSGGQ QQRVAIARSL CMQPKVMLFD EPTSALDPEM INEVLDVMVS
LAKDGMTMIV VTHEMGFARK VADRVVFIDK GVIVEVAEPE AFFTAPKNER TREFLGKILQ
H
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