| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0238 |
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| Symbol | |
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| ID | 3962296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 236065 |
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| End bp | 236715 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637915073 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_521526 |
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| Protein GI | 89899055 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTATGT TCTTGGAGCA AATACACGGC ATCGCCCAGT ACTATCCGGT GATATTGAAG
GGCATTGGTG TGACCCTGGC GCTGTCGTTC ATTGGCATTG TTGCGGGGAC TCTCATCGGT
TTCGTGCTGG GCATAGGCCG GGCCAGTTCC CACAAGTTGC TATCGCTTGT AGTCGGCGCC
TACACCGATA TTTTTCGCGG CACACCGGTG CTGGTCCAGG TCTTTGTCGT TTTTTTTATA
CTTCCTGAAG CGGGTATTGA GCTTGACTCA TTCACTGCGG GTGCGCTGGC GCTGTCCAAT
ATAGCGGCTT GCTTTATCTC TGAAATAGTG GCATCCGGGA TCAGGGCGGT GCCCATCGGG
CAGGTAGAGG CAGCCGCATC CGCCGGCCTC ACCCGCTTGC AGCAACTCAG GCTGGTGGTG
ATGCCGCAAG CCACCAGAAT GATTGTTCCT TCGCTGGTCG GGCAATTCGT TTTGCTGGTC
AAGGACTCTT CGGTTGTCTC CGCGATCGGG CTTCTCGATC TGACGCGGTC CGGCTGGATC
ATCGTGCAGA GTGTCCCCAA TGGAATGCTG GTTTTTTCTG TGGTGGGCAT CGGGTATTTC
CTGATCTGTT ATCCGCTGCT TCATTTGTCT CGGCGAATGG AAAAGACCTG A
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| Protein sequence | MTMFLEQIHG IAQYYPVILK GIGVTLALSF IGIVAGTLIG FVLGIGRASS HKLLSLVVGA
YTDIFRGTPV LVQVFVVFFI LPEAGIELDS FTAGALALSN IAACFISEIV ASGIRAVPIG
QVEAAASAGL TRLQQLRLVV MPQATRMIVP SLVGQFVLLV KDSSVVSAIG LLDLTRSGWI
IVQSVPNGML VFSVVGIGYF LICYPLLHLS RRMEKT
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