Gene Rfer_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0228 
Symbol 
ID3960134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp227325 
End bp228827 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content62% 
IMG OID637915063 
Producthypothetical protein 
Protein accessionYP_521516 
Protein GI89899045 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03225] benzoyl-CoA oxygenase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC CCACACCCAC TGAAATCATA GAACCCGTTG AAGCCATCCA GAACGATGCC 
TTTGTCGCCG TCAGCTACGA CGACCTGATC CCCAACAACG TCGATCTATC GTCCGACAAG
CAATTGCAAC GGGCGCTTGA GGGCTGGCAG CCCAACTACA TTGATTGGTG GAAAGACATG
GGCCCCGAGG GTTTTCAGAA TGCCGATGTC TACCTGCGCA CGGCGGTGGG TGTGGATCCC
AGCGGCTGGG CCAAGTTCGG CCACGTCAAG ATGCCGGACT ACCGCTGGGG CATTCTGCTG
GCACCCAAGG AAGAGGGGCG CACCATCCCC TGCGGCCGCC ACAAGGGCGA ACCGGCCTGG
CAGGAAGTGC CCGGCGAATA CCGCTCGCTG TTGCGCCGCC TGATCGTGGT GCAGGGCGAC
ACCGAGCCGG CCTCGGTGGA GCAACAGCGC TTTCTGGGCG CCACCGCGCC TTCGTTGTAC
GACATGCGCA ACCTGTTCCA AGTCAACGTC GAAGAGGGGC GCCACCTGTG GGCCATGGTC
TACCTGTTGG TCAAGTACTT TGGCCGTGAT GGCCGCGAAG AGGCGCAGGC ACTGCTGGAG
CGCCGCTCGG GCCAGCAGGA CAACCCCCGC ATTCTGGGCG CCTTCAACGA GCGCACACCT
GACTGGTTGA GCTTCTTCAT GTTCACCTAT TTCACCGACC GCGACGGCAA GATGCAACTG
GCCGCACTGG CGCAGTCCGG CTTCGATCCG CTGTCGCGCA GCTGCCGCTT CATGCTGACC
GAAGAGGCGC ACCATCTGTT CGTCGGTGAA ACCGGTGTCG GCCGCACCAT AGAGGCCACG
TGCCTGGCCA TGAAGGCCGC CGGCATCACC GACCCCTATG CCAAGGAAGC CATCCGCAAG
CTCGGCGTGA TCGACCTGCC CACGCTGCAA AAGAAGGCCA ACTTTCACAT GTCGGTGACG
CGTGATTTGT TCGGCTCCGA GATTTCATCC AACGCGGCCA GTGCGTTCAG CACCGGCCTC
AAGGGCCGCT TCAATGAAAC CGCCCTTGAT GACGACCACC AGCTCGAAAA CGCCACCTAC
CCGGTGCAGC GCGTGATCGA CGGCCAGTTG GTGACCGAAG AGGTGCCCGC CCTGCGCGCT
ATCAACAGCC GTCTGCTGGA CGACTACATT GCCGATTGCC AGGGCGGTAT CGACCGCTGG
AACAAGGTGA TCGAGAAGTG TGGCATTGCC TTCCGATTCA GCCAGCCGCA CAAGGGTTTT
AACCGCAGGA TAGGCGAGTT TGCCGAGACG CATGTCAGCC CGGCCGGTGA ACTGCTGAGC
GCGCAAGCGT GGCATGCCGG AAAGAGCGAC TGGCTGTGCT CGGACGAAGA CCACACATTC
ATCAACTCCC TGATGAAACC CTGCGTGCAA CCTGGCCAAT ACGCCAGCTG GATTGCACCA
CCGCGCGTGG GCATCAACAA CCAGCCCAAG GACTTTGAGT ACGTGCGCAT CGAGCACTCC
TGA
 
Protein sequence
MSEPTPTEII EPVEAIQNDA FVAVSYDDLI PNNVDLSSDK QLQRALEGWQ PNYIDWWKDM 
GPEGFQNADV YLRTAVGVDP SGWAKFGHVK MPDYRWGILL APKEEGRTIP CGRHKGEPAW
QEVPGEYRSL LRRLIVVQGD TEPASVEQQR FLGATAPSLY DMRNLFQVNV EEGRHLWAMV
YLLVKYFGRD GREEAQALLE RRSGQQDNPR ILGAFNERTP DWLSFFMFTY FTDRDGKMQL
AALAQSGFDP LSRSCRFMLT EEAHHLFVGE TGVGRTIEAT CLAMKAAGIT DPYAKEAIRK
LGVIDLPTLQ KKANFHMSVT RDLFGSEISS NAASAFSTGL KGRFNETALD DDHQLENATY
PVQRVIDGQL VTEEVPALRA INSRLLDDYI ADCQGGIDRW NKVIEKCGIA FRFSQPHKGF
NRRIGEFAET HVSPAGELLS AQAWHAGKSD WLCSDEDHTF INSLMKPCVQ PGQYASWIAP
PRVGINNQPK DFEYVRIEHS