Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0228 |
Symbol | |
ID | 3960134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 227325 |
End bp | 228827 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915063 |
Product | hypothetical protein |
Protein accession | YP_521516 |
Protein GI | 89899045 |
COG category | [S] Function unknown |
COG ID | [COG3396] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03225] benzoyl-CoA oxygenase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.11346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC CCACACCCAC TGAAATCATA GAACCCGTTG AAGCCATCCA GAACGATGCC TTTGTCGCCG TCAGCTACGA CGACCTGATC CCCAACAACG TCGATCTATC GTCCGACAAG CAATTGCAAC GGGCGCTTGA GGGCTGGCAG CCCAACTACA TTGATTGGTG GAAAGACATG GGCCCCGAGG GTTTTCAGAA TGCCGATGTC TACCTGCGCA CGGCGGTGGG TGTGGATCCC AGCGGCTGGG CCAAGTTCGG CCACGTCAAG ATGCCGGACT ACCGCTGGGG CATTCTGCTG GCACCCAAGG AAGAGGGGCG CACCATCCCC TGCGGCCGCC ACAAGGGCGA ACCGGCCTGG CAGGAAGTGC CCGGCGAATA CCGCTCGCTG TTGCGCCGCC TGATCGTGGT GCAGGGCGAC ACCGAGCCGG CCTCGGTGGA GCAACAGCGC TTTCTGGGCG CCACCGCGCC TTCGTTGTAC GACATGCGCA ACCTGTTCCA AGTCAACGTC GAAGAGGGGC GCCACCTGTG GGCCATGGTC TACCTGTTGG TCAAGTACTT TGGCCGTGAT GGCCGCGAAG AGGCGCAGGC ACTGCTGGAG CGCCGCTCGG GCCAGCAGGA CAACCCCCGC ATTCTGGGCG CCTTCAACGA GCGCACACCT GACTGGTTGA GCTTCTTCAT GTTCACCTAT TTCACCGACC GCGACGGCAA GATGCAACTG GCCGCACTGG CGCAGTCCGG CTTCGATCCG CTGTCGCGCA GCTGCCGCTT CATGCTGACC GAAGAGGCGC ACCATCTGTT CGTCGGTGAA ACCGGTGTCG GCCGCACCAT AGAGGCCACG TGCCTGGCCA TGAAGGCCGC CGGCATCACC GACCCCTATG CCAAGGAAGC CATCCGCAAG CTCGGCGTGA TCGACCTGCC CACGCTGCAA AAGAAGGCCA ACTTTCACAT GTCGGTGACG CGTGATTTGT TCGGCTCCGA GATTTCATCC AACGCGGCCA GTGCGTTCAG CACCGGCCTC AAGGGCCGCT TCAATGAAAC CGCCCTTGAT GACGACCACC AGCTCGAAAA CGCCACCTAC CCGGTGCAGC GCGTGATCGA CGGCCAGTTG GTGACCGAAG AGGTGCCCGC CCTGCGCGCT ATCAACAGCC GTCTGCTGGA CGACTACATT GCCGATTGCC AGGGCGGTAT CGACCGCTGG AACAAGGTGA TCGAGAAGTG TGGCATTGCC TTCCGATTCA GCCAGCCGCA CAAGGGTTTT AACCGCAGGA TAGGCGAGTT TGCCGAGACG CATGTCAGCC CGGCCGGTGA ACTGCTGAGC GCGCAAGCGT GGCATGCCGG AAAGAGCGAC TGGCTGTGCT CGGACGAAGA CCACACATTC ATCAACTCCC TGATGAAACC CTGCGTGCAA CCTGGCCAAT ACGCCAGCTG GATTGCACCA CCGCGCGTGG GCATCAACAA CCAGCCCAAG GACTTTGAGT ACGTGCGCAT CGAGCACTCC TGA
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Protein sequence | MSEPTPTEII EPVEAIQNDA FVAVSYDDLI PNNVDLSSDK QLQRALEGWQ PNYIDWWKDM GPEGFQNADV YLRTAVGVDP SGWAKFGHVK MPDYRWGILL APKEEGRTIP CGRHKGEPAW QEVPGEYRSL LRRLIVVQGD TEPASVEQQR FLGATAPSLY DMRNLFQVNV EEGRHLWAMV YLLVKYFGRD GREEAQALLE RRSGQQDNPR ILGAFNERTP DWLSFFMFTY FTDRDGKMQL AALAQSGFDP LSRSCRFMLT EEAHHLFVGE TGVGRTIEAT CLAMKAAGIT DPYAKEAIRK LGVIDLPTLQ KKANFHMSVT RDLFGSEISS NAASAFSTGL KGRFNETALD DDHQLENATY PVQRVIDGQL VTEEVPALRA INSRLLDDYI ADCQGGIDRW NKVIEKCGIA FRFSQPHKGF NRRIGEFAET HVSPAGELLS AQAWHAGKSD WLCSDEDHTF INSLMKPCVQ PGQYASWIAP PRVGINNQPK DFEYVRIEHS
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