Gene Rfer_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0227 
Symbol 
ID3960133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp226601 
End bp227182 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content60% 
IMG OID637915062 
Producthemerythrin HHE cation binding protein 
Protein accessionYP_521515 
Protein GI89899044 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.172932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGTG AAAGTTTACG AATCATTCAC GATGAACACG ACGCCTTGTC GGCCATGCTG 
CGCTCCATTG GCATGATGGT GGATCGCGGC CCCGGCAACG AGCCCGAGAG TTTTTTTGAT 
GTGTTGCGGG CCATGCTGTT CTACATTGAC GAGTTCCCCG AGCGGCTGCA CCACACCAAG 
GAAACCGAGC TGTTGTTTCC CCGCGTCGTC CGCCTCGCAC CGGAGACCGC GCAGGCTATC 
GAGCAGCTGG ACAAGGACCA TACACGTGGC GAATCCGCCG TGCGCGAGTT GCAGCACCTG 
CTGCTGGCTT GGGAGTTGGT TGGCGATTCC CGCCGGGTCG CGTTTGAAAC CGCCGTCAAA 
GTGTATCTGG CCTTCTACCT GGAACACATG CGGCTGGAAG AAACGGTGAT TCTGCCGGTA 
GCCCAAAAAG TATTGAGCGC CGCCGACTGG GACGAACTCG ACGCCGCGTT TGCCACCAAC 
TGCGACCCGC TCACCGGCAA ATACCCGCGT GACCCGGCCT ATGACCGTTT GTTCACACGC 
ATTGTGTCGC AGGCGCCCGC CCCCATTGGC CTGGGGGCGT AA
 
Protein sequence
MSRESLRIIH DEHDALSAML RSIGMMVDRG PGNEPESFFD VLRAMLFYID EFPERLHHTK 
ETELLFPRVV RLAPETAQAI EQLDKDHTRG ESAVRELQHL LLAWELVGDS RRVAFETAVK 
VYLAFYLEHM RLEETVILPV AQKVLSAADW DELDAAFATN CDPLTGKYPR DPAYDRLFTR 
IVSQAPAPIG LGA