| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0226 |
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| Symbol | |
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| ID | 3960132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 225386 |
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| End bp | 226588 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915061 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_521514 |
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| Protein GI | 89899043 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.206359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACG CTTTCATTTG TGATGCCATC CGCACCCCTT TTGGCCGCTA CGGTGGCGCG
CTCTCGGGCG TGCGTGCCGA CGACCTGGGT GCCATCCCGT TGCGTGCCTT GATGGCCCGC
AACCCCCAGG TCGATTGGGC TGCCCTGACC GACGTGTTGC TGGGCTGTGC CAACCAGGCC
GGTGAAGACA ACCGCAACGT GGCGCGTATG TCGGCGCTGT TGGCCGGACT GCCGCAAGAG
GTGCCCGGTG CCACCATCAA CCGCCTGTGT GGCTCCAGCC TGGACGCGGT CGGCGCGGCG
GCGCGGGCCA TCAAGAGTGG TGAAGCGCAA CTGATGATTG CAGGGGGTGT GGAGAGCATG
AGCCGCGCCC CGTTTGTCAT GCCCAAAATG GATGCCGCCT TCAGCCGCAG CAATGCCGTT
TATGACACCA CAATTGGCTG GCGCTTTGTC AACAAGCTCA TGAAAGCACA GTACGGCGTG
GACTCCATGC CCGAGACGGC CGAAAACGTA GCCACTGATT TCCACATCGA ACGCGAGGCG
CAAGACTTGA TGGCCTTGCG CTCGCAGCAA AACGCATTAC GTGCCCAGCA GAGTGGTTTT
TTTGATGTCG AAATCACCCC GGTGTCGATC TCGCAGAAAA AAGGCGACCC GCTGCTGGTG
ACGCAAGACG AACACCCGCG CGCCACCACA CTGGAATCTC TGGCCAAGCT CAAGGGTGTG
GTGCGACCCG ATGGCACGGT CACCGCCGGC AATGCCTCAG GGGTCAACGA TGGGGCCTGT
GCCCTGCTGC TGGCCAACGA GGCAGCCGCT GCCCGCTATG GATTGAGCCC CCGCGCCCGC
GTGGTGGGCA TGGCCGCCGC TGGCGTGGCA CCGCGCATCA TGGGTTTTGG CCCGGCGCCG
GCCACACGCA AGGTGCTGGA GCTCACCGGC CTGAGCCTGG CGCAGATGGA TGTGATTGAA
CTCAATGAAG CCTTTGCCGC ACAGGGCCTG GCGGTGCTGC GCGACCTGGG GCTGGCCGAT
GACGATGCAC GTGTCAACCC CAATGGTGGT GCCATCGCCC TGGGTCATCC CTTGGGGGCC
AGTGGTGCGC GGCTGGTGAC CACTGCCGTT AACCAGTTAC ACCGCAGCGC TGGCCGCTAC
GCGCTGTGCA CCATGTGTAT TGGTGTGGGC CAGGGCATTG CGCTGGTGCT TGAGCGTGTC
TGA
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| Protein sequence | MTHAFICDAI RTPFGRYGGA LSGVRADDLG AIPLRALMAR NPQVDWAALT DVLLGCANQA
GEDNRNVARM SALLAGLPQE VPGATINRLC GSSLDAVGAA ARAIKSGEAQ LMIAGGVESM
SRAPFVMPKM DAAFSRSNAV YDTTIGWRFV NKLMKAQYGV DSMPETAENV ATDFHIEREA
QDLMALRSQQ NALRAQQSGF FDVEITPVSI SQKKGDPLLV TQDEHPRATT LESLAKLKGV
VRPDGTVTAG NASGVNDGAC ALLLANEAAA ARYGLSPRAR VVGMAAAGVA PRIMGFGPAP
ATRKVLELTG LSLAQMDVIE LNEAFAAQGL AVLRDLGLAD DDARVNPNGG AIALGHPLGA
SGARLVTTAV NQLHRSAGRY ALCTMCIGVG QGIALVLERV
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