Gene Rfer_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0210 
Symbol 
ID3960194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp207965 
End bp208678 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID637915045 
ProductABC transporter related 
Protein accessionYP_521498 
Protein GI89899027 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGTG ACTTGATCGT CGATGCCCGT GGCATCCACG CCTGGTATGG CTCCAGCCAT 
GTGCTGCACG GCGCCCAGTT GCAGATTGCC CGTGGCCAGA CCGTGGGCCT GCTCGGGCGC
AATGGCATGG GCAAGAGCAC GCTGATCCGC ACGCTGCTGG GCCATGTGGC GCAGCGCGAC
GGCCACATCA CGCTGTTTGG CAAGGATGCC TCGCGCTTCA AGCCGCACAA AGTCGCACGT
CTGGGTGTGG CTTATGTGCC CGAAGGGCGC GGCGTGTTCC CCAACCTGAC AGTGCGCGAG
AATCTGGTAA TGGCGGCGCG CCGGGGTGTC GATGGCCGCA ACGACTGGTC GTTCGAGCGT
GTCATGGCCA CCTTTCCGCG CTTGAAGGAG CGGCTGACGA ATCTGGGCGC GCAGCTCTCC
GGCGGCGAGC AACAGATGCT GTCGATTGGC CGGGCGCTGA TGACACACCC CGAGCTGATC
GTGCTGGACG AGGCCACCGA AGGCCTGGCA CCGCTGATCG TGGCCGACAT CTGGCGCGTG
ATTGGCGAAA TTCGCAAGAG CGGCATCGCC ACGCTGATCG TGGACCGCGA CTACCGCCGC
GTGCTGGCGC ATGCCGACCA GGCCCTGGTG CTGCAAAAAG GGCAGGTGCT GCTGCAAGGC
ACGGCGGAGG ATGTGGCCAA CGACCCGGCA CTGTCGACCT ACCTGGGCGT CTGA
 
Protein sequence
MNRDLIVDAR GIHAWYGSSH VLHGAQLQIA RGQTVGLLGR NGMGKSTLIR TLLGHVAQRD 
GHITLFGKDA SRFKPHKVAR LGVAYVPEGR GVFPNLTVRE NLVMAARRGV DGRNDWSFER
VMATFPRLKE RLTNLGAQLS GGEQQMLSIG RALMTHPELI VLDEATEGLA PLIVADIWRV
IGEIRKSGIA TLIVDRDYRR VLAHADQALV LQKGQVLLQG TAEDVANDPA LSTYLGV