Gene Rfer_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0207 
Symbol 
ID3960190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp205907 
End bp206689 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID637915042 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_521496 
Protein GI89899025 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGTT TTTACTGCCC AACCTCGCTG CGCTGCGGTG ACTTGCTTGA CCTGCCAGCC 
AGCGCTGCCC GTCACGTACA AGTACTGCGC CTGCAGCCAG GCGACAGCAT CACGCTGTTC
AATGGCGGCC CCGGCTGGGA CGAACGCGAC TCGGAGCACA CCCAGGGCGG CGAGTTTGAG
GCCAGCGTCA CGCGCATGGG CCGCAGCGAT GTGCAGGTGA AGGTCGGCGC CTATCACGCG
GTAGAGCGCG AAGCAGCGCA TCGGGTGCAT CTGGCCGTGG GCATGCCGGC CAACGAGCGC
ATGGACTGGC TGGTCGAAAA AGCCACCGAA CTGGGCGTGG CCAGTATTCA GCCCCTGATG
ACCGAGCGCA GCGTGCTGCG GCTCAACCCG GAGCGAGCCG GAAAAAAGCA AGCGCACTGG
CAAAGTGTGG CGGTGGCCGC TTGTGAGCAG TGCGGTGGCA ACCGGGTGCC GGTGATTCAT
GCAGTCATGA CCTTGGCAGC TTGGATCAAG GCGCAACCAG CGCAGGCAAG CGATCAGCGC
TTGTTGTTGT CGTTGCGCCC GGGCGCGCAA AGTGTTCGTG CCGCCGTGAA GGCCTTCGCC
GATCCTGCCA GTGCCGGCGC CCATACCGAA GCCATCACCT TTTTGTCCGG CCCTGAAGGC
GGTTTGAGCC CGGCCGAGGA AGATATCGCG CTGGCCTGTG GCTTTGCGCC GGTGACACTG
GGTGCACGCG TGCTGCGCGC CGAAACGGCA GCCTTGGCCG CGTTGGCCGC CTTGCTGCTG
TAA
 
Protein sequence
MPRFYCPTSL RCGDLLDLPA SAARHVQVLR LQPGDSITLF NGGPGWDERD SEHTQGGEFE 
ASVTRMGRSD VQVKVGAYHA VEREAAHRVH LAVGMPANER MDWLVEKATE LGVASIQPLM
TERSVLRLNP ERAGKKQAHW QSVAVAACEQ CGGNRVPVIH AVMTLAAWIK AQPAQASDQR
LLLSLRPGAQ SVRAAVKAFA DPASAGAHTE AITFLSGPEG GLSPAEEDIA LACGFAPVTL
GARVLRAETA ALAALAALLL