Gene Rfer_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0206 
Symbol 
ID3960189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp205013 
End bp205666 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID637915041 
ProductOmpA/MotB 
Protein accessionYP_521495 
Protein GI89899024 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TCGCATCCAA GACACGCACC TTAGTTTTTG GCGTGAGCGC TGTTGCCCTG 
CTGGTCAGCG GTTGCGCCAA CATGACCGAG ACCCAGCGCA GTTCAGCCAT CGGCGCCGGT
GTGGGCGCCC TGGCAGGCGC CGCCATTGGC GACAGCCGCG AGGCGACCGT GATCGGTGCC
GGCGTCGGCG CACTGGGCGG CTATATCTGG TCGACGCAGA TGGCCAAGAA GAAGGCAGAT
ATGGAACGCG CCACGGCAGG CACCGGGGTA GATGTCATGC AGACGGCTGA CAACCAGCTC
AAGCTCAATA TTCCGAGTGA CATTTCGTTC GACATCAACC GCTTCGACAT CAAGCCCAAC
ATGCGGCCGA TCCTGGACCA GTTTGCGCAA GGCTTGAGCA GCCAGCCCAA CACCGAAATC
CGCATCATCG GTCACACCGA CAGCACCGGT TCGGACAGCA TCAACGACCC GCTGTCGGTC
AACCGTGCCG CCAGTGCGCG CGACTACCTG GTTGCCCGCG GCGTGGATGG GCGGCGCATC
CAGATCAATG GCCGCGGCTC ACACGAGCCC ATTGCAGATA ACAACACGGA ACGAGGCCGC
GCCCAGAACC GCCGCATCGA GATATTCCTG GCCGAGCGTT CGGTCGCCCG GTAG
 
Protein sequence
MKTIASKTRT LVFGVSAVAL LVSGCANMTE TQRSSAIGAG VGALAGAAIG DSREATVIGA 
GVGALGGYIW STQMAKKKAD MERATAGTGV DVMQTADNQL KLNIPSDISF DINRFDIKPN
MRPILDQFAQ GLSSQPNTEI RIIGHTDSTG SDSINDPLSV NRAASARDYL VARGVDGRRI
QINGRGSHEP IADNNTERGR AQNRRIEIFL AERSVAR