Gene Rfer_0193 details

Gene Information

• Locus tag: Rfer_0193
• ID: 3961347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 190357
• End bp: 192348
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637915028
• Product: hypothetical protein
• Protein accession: YP_521482
• Protein GI: 89899011
• COG category: [I] Lipid transport and metabolism; [R] General function prediction only
• COG ID: [COG3240] Phospholipase/lecithinase/hemolysin

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAT TCAGAGTTCT AGCAACGGCC CTCGCCGCCG CGCTGCTGGT GGCCGCCTGC 
GGTGGTGGTG GCAATGGCGA TCAGACGCCC CCAGTCAAGT ATTCGGCAGT GGTGTCCTTT 
GGCGACAGTC TGAGTGATGC TGGCACTTAC AACGTTGGCC CAATCAAGAA CGCCGGCGGT 
GGCATGTTCA CCGTGAACGG CATTGCTGGC GCTATTGGTG CCGATACCGT GCCGAGCGAT 
AACTGGGCCC AACTGGTTTC CGCCTCGGCC GTCGGCAAAA CCTCCTGCTC GGCACGGGTC 
GGTGGTTTCG GGGTGGCCGA AACTGCGGTC GCCGGATGTA CCAATTACGC GCAAGGCGGC 
TCCCGTGTGA CGGATCCGAA CGGGATTGGC AACGCATCGG GGGGCGCGGT CGCGGCAGGA 
ACCACAACAG CAGGTGCTCT GACGGAGCCG GTTGTGACGC AGATTGCCAA TTACGTCAAG 
GACAGTGGCG GCTTCACGGG GAACGAACTG ATCACGGTAC TGGCCGGTCC CAATGACCTG 
TTTGCACAAC TCACCAAGTT GACAGTCGAT GCAACGGCTG CCGGCAACGC CGCTGGCAAC 
ACCGCTTTTG CGACCGCCGT CGTTGGCGCG CTGGCCGCTG ATTCGACCAA TCCCGCCACG 
GCGGCCACCG CCATCGGCAC CGCCATGCCC CAGGCGCAGG CGGCCGCCGC GAAGGTGGCA 
GGTGCCACCA CCACGACCAT CATGCAGGCG GCAGTCACCG GTGCGGTGCA GGCGGCGGCA 
CTGGCGGGCA ATACCAAGGT CATGGACATG ACCTATATCA ATGGCGTTGT GACGACAGCC 
AAAGACTTTG CCACGGCTGC GGGCACGGCT GCAGGAAATC AGACATTTGC CGGGACCTTG 
ATAGGTGCCC TGGCCGCTGA TGCGACCACC CCTGCAACTG CCGGACCGAT TATTCAGACC 
GCTTTTGTGA CTGAAGCAGC TAAAGGTAGC GCCATGAACG TGGTCGTAGG GGCCGCAGCC 
GCTGCAGCCG CTGGACAGGG CAATACAAAA GTTGTGACTG ACCCAACCTA TGTGCCAACG 
CTGGTTGCCA ACGCAACCAC TGCAGCAAAC GCAGCGGGTG CAGCAGCGGG TGCAACAGCT 
TTCGCGACCA AGCTCGCAGG CTTGCTTGCT GCCGATGCTA CGGTGCCCGC CACCGCAGGT 
CCAGCCATTG GCGCTGCCAT GGCTGCGGCA AAAGCGACCG CGTCTGCAGC CCCAGGTGCT 
ACAGCCGACT CTGTTAACAC GGCGGTAGTC ACCGCGGCCG TGCAGGCAGC TGCAGCCGCG 
GGCAATACCA AGGTCATGAA CATGACTTAT ATCAACGCCA TTGCCGCCTC CGCCCAAGCG 
TCTGCGACCA CCGCCGGCAC GGCCGCTGGA AATCAATACG TTGCAACCAC CGGCGCCGCC 
AATGCCGGCG TCGGCGTGGT CACGGCGGCC GCCACCTTGG CGGGCTATGT GAAAGACATG 
GTCAACAAGG GTGCCAAGCA TGTGGTCGTG CTGAATCTGC CCGACATGAG CCTGACACCG 
AGTGCGCGCA GCACGATCAT TTATAACGCG GACGGCAGCA TCAAGGACAA CTCCTCGCAG 
CGGCTCGTTC TGGCCTTGGT CAAAGCTTTT AATGCCGAGT TACAGAAGGA CCTGGGAGTC 
ACCCTGGGTG TCCCCGCCAA TGGCGTGCTC TTGGTTGACT TCTTTACCAA CATGCAGAAC 
AACGTCAACG ACCCGGGTCA CTACGCTCTC ACCAACACGA AGGACGTTGC ATGCAACTTA 
ACAGCACCCG CCAATGCACT GGCCACGGTG GGGCTCGATG ACGGCAGTTC TCTGGTTTGC 
AATGGAAGCA ACCTGATTGC TGGTGATACG TCGCATTACA TGTTTGCCGA CAAGGTCCAC 
CCAACACCGT ACAGTCACAA ACTTTTGTCC CAAGTCGTCA ACAAAATCAT GATCCAGGCT 
GGCTGGCTCT AA 

 

Protein sequence

MKQFRVLATA LAAALLVAAC GGGGNGDQTP PVKYSAVVSF GDSLSDAGTY NVGPIKNAGG 
GMFTVNGIAG AIGADTVPSD NWAQLVSASA VGKTSCSARV GGFGVAETAV AGCTNYAQGG 
SRVTDPNGIG NASGGAVAAG TTTAGALTEP VVTQIANYVK DSGGFTGNEL ITVLAGPNDL 
FAQLTKLTVD ATAAGNAAGN TAFATAVVGA LAADSTNPAT AATAIGTAMP QAQAAAAKVA 
GATTTTIMQA AVTGAVQAAA LAGNTKVMDM TYINGVVTTA KDFATAAGTA AGNQTFAGTL 
IGALAADATT PATAGPIIQT AFVTEAAKGS AMNVVVGAAA AAAAGQGNTK VVTDPTYVPT 
LVANATTAAN AAGAAAGATA FATKLAGLLA ADATVPATAG PAIGAAMAAA KATASAAPGA 
TADSVNTAVV TAAVQAAAAA GNTKVMNMTY INAIAASAQA SATTAGTAAG NQYVATTGAA 
NAGVGVVTAA ATLAGYVKDM VNKGAKHVVV LNLPDMSLTP SARSTIIYNA DGSIKDNSSQ 
RLVLALVKAF NAELQKDLGV TLGVPANGVL LVDFFTNMQN NVNDPGHYAL TNTKDVACNL 
TAPANALATV GLDDGSSLVC NGSNLIAGDT SHYMFADKVH PTPYSHKLLS QVVNKIMIQA 
GWL