Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0171 |
Symbol | |
ID | 3960173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 173712 |
End bp | 174839 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637915007 |
Product | hypothetical protein |
Protein accession | YP_521461 |
Protein GI | 89898990 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.330821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCACC ATCTGGCCAA CATCTACCGC TTGGGTATCA AGGAACTGTG GAGCCTGTGG CGCGATCCGA TGATGCTGTT TCTCATCGTT TACACCTTCA CGGTGGCCAT CTACACGGCA GGCACGGCCA TGCCGGAGAC CATGCACCGC GCGCCGATTG CGGTGGTGGA CGAAGACGAC TCGGTCCTGT CCGCACGCAT CACGGCAGCG TTTTATCCGC CGCAATTTAC CCCGCCAACG CGCATCACAT TGTCCGAGGT TGATCCGGGT CTGGACTCGG GCCGCTATAC CTTTGTGCTC AACATACCGC CCAACTTCCA GCGTGACGTG CTGGGGGGCC ACGCGCCGCA ACTGCAACTC AACATTGACG CCACGCGCAT GAGCCAGGCA TTTGCGGGCA ACGGCGCCAT CCAGCAGATC GTGATGGGCG AAGTCAACGA ATTCGTGCAG GGCTACCGGG GCACGACCCC GATGCCGGTC GAGCTGGCTA CGCGTGCACG CTTCAATCCG GCGCTGCAGC CATCCTGGTT TGGCTCCCTG ATGGAAGTGA TCAACAACAT CACCATGCTG TCCATCATCC TGACCGGTGC CGCGCTGATC CGCGAGCGCG AGCACGGCAC CGTCGAGCAT TTGCTGGTGA TGCCGGTGAC ACCCCTTGAG ATCATGCTGG CCAAGGTGTG GTCCATGGCC CTGGTGGTGT TGCTGGCCGC GGTGGTGTCA CTCACTGTGG TGATTCAGGG TGTGCTGAAG GTGCCCATTG AGGGTTCGAT CGCGCTGTTC CTGATCGGGG CCACCTTGCA CCTGTTTGCG ACCACGTCCA TGGGCATCTT CATGGCCACG TTGGCGCGCA GTATGCCGCA GTTTGGCCTG CTGATGATGC TGACCATGAT GCCGCTGCAA ATGCTGTCGG GGGGCATGAC CCCGCGCGAG AGCATGCCGG TGTGGGTGCA GCAGGTGATG TCGCTGGCGC CCACAACGCA CTTTACCGAG CTGAGTCAGG CCATTCTCTA CCGGGGCGCA GGGCTGGCTG TGGTGTGGAC TTCATTTGCA GCGCTGCTTC TGATCGGCTC AGCGTTGTTT GCGCTGTCCC TGGCGCGCTT TCGCAAGACG ATTTCGCAGA TGGCCTGA
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Protein sequence | MRHHLANIYR LGIKELWSLW RDPMMLFLIV YTFTVAIYTA GTAMPETMHR APIAVVDEDD SVLSARITAA FYPPQFTPPT RITLSEVDPG LDSGRYTFVL NIPPNFQRDV LGGHAPQLQL NIDATRMSQA FAGNGAIQQI VMGEVNEFVQ GYRGTTPMPV ELATRARFNP ALQPSWFGSL MEVINNITML SIILTGAALI REREHGTVEH LLVMPVTPLE IMLAKVWSMA LVVLLAAVVS LTVVIQGVLK VPIEGSIALF LIGATLHLFA TTSMGIFMAT LARSMPQFGL LMMLTMMPLQ MLSGGMTPRE SMPVWVQQVM SLAPTTHFTE LSQAILYRGA GLAVVWTSFA ALLLIGSALF ALSLARFRKT ISQMA
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