| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0169 |
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| Symbol | |
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| ID | 3960171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 169851 |
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| End bp | 170921 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915005 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_521459 |
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| Protein GI | 89898988 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGA ATTTGAAGAC CGCCATCACT TCCGCCTTGT TGCTGGCTGC GGCAGCGGCG
GCCCTGCTGG GATGGGGCCC CTGGCGTGAA CAGGGTTTGG GGGAGGGTTT TGTCAGCGGC
AACGGGCGCA TCGAAGCCAC CGAGATCGCA ATCGCCACCA AGCTGGCCGG ACGCGTGGAA
AGAATCCTGG TGGCCGAGGG GGAATTTGTC AAAGCCGGTC AGCCCCTCGC CCAGATGCAG
ATTGAGAGCC TGCAGGCCCA GCGCGAAGAG GCACTGGCCC GACTGCAGCA GGCGCAACAA
GCCGTCAGCG GTGCCGAAGT TCAGGTGGCC CAGCAAGAGG CCAATTACCA GGCGACGCTG
GCTGTGGTGG CCCAGCGTGA AAGCGACCTC GACACCGCGC AGCGCCGACT GCCGCGCTCG
GAAAAACTGG CTCAGGAAGG CTTCTTTTCC AGCCAACTCC TGGACGATGA CCGTGCCAAA
GTGCGCAGTT TGCAGGCCAG CGTATCAGCT GCCAAGTCGC AAGCCAAAGC AGCGCAGGTC
GGCATCTCTG CGGCACGCAA CCAGATCTCT GGCGCGCAAG CCAATGTGCG GGCACTTGAG
GCCACGCTGG CCCGTATTGA CGTGGAACTG GCCGACAGTG AGCTCAAGTC GCCGCGAGAC
GGTCGCGTGC AGTTCCTGGT GGCACAACCC GGCGAGGTGC TGGGCGGCGG CGGGCGTGTG
CTGAATCTGG TTGACCTGTC CGATGTTTAC ATGACTTTTT TCTTGCCTGA AACCGTGGCT
GGACGTGTCG CCCTGGGCAG CGATGTGCGT ATTGTGTTGG ACGCGGCTCC GCAATTTGTG
ATTCCGGCCA AAGTGTCTTT TGTGGCCAGT ACCGCCCAAT TCACACCCAA GACGGTGGAA
ACCGCCAGCG AGCGGCAAAA GCTCATGTTC CGGGTGCGGG CGCAGATCGA TCCGGGCTTG
CTGCAACGGC ATCTGGAGCA AGTCAAGACC GGTTTGCCCG GGGTGGCGTG GCTCAAGCTT
GACTCCAAGG CTCAGTGGCC ATCCCACCTG ACCGTCAAAG CTGAACCGTG A
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| Protein sequence | MKTNLKTAIT SALLLAAAAA ALLGWGPWRE QGLGEGFVSG NGRIEATEIA IATKLAGRVE
RILVAEGEFV KAGQPLAQMQ IESLQAQREE ALARLQQAQQ AVSGAEVQVA QQEANYQATL
AVVAQRESDL DTAQRRLPRS EKLAQEGFFS SQLLDDDRAK VRSLQASVSA AKSQAKAAQV
GISAARNQIS GAQANVRALE ATLARIDVEL ADSELKSPRD GRVQFLVAQP GEVLGGGGRV
LNLVDLSDVY MTFFLPETVA GRVALGSDVR IVLDAAPQFV IPAKVSFVAS TAQFTPKTVE
TASERQKLMF RVRAQIDPGL LQRHLEQVKT GLPGVAWLKL DSKAQWPSHL TVKAEP
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