Gene Rfer_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0167 
Symbol 
ID3960169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp167332 
End bp167970 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID637915003 
Productbeta-lactamase-like 
Protein accessionYP_521457 
Protein GI89898986 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGCT ATCTGACCGT CCCCGTGACG CCCTATCAAC AAAACTGCTC GCTGCTGTGG 
TGCGACCAGA CGATGAAGAC CGCCGTACTT GATCCCGGTG GGGATCTGGA ACGGGTGTTG
GCACAAGTCG CGCGCGCAGG CCTGGTTCTT GACCAGATCT GGCTGACGCA TGGGCACATC
GACCATGCAG GAGGAGCCGC GGAGCTGGCG CTCAGGTTTG GCCTGCCCAT CATCGGGCCG
CATCAAGCGG ATCAGTTCTT GATCGATGGC TTGGCGCTAC AGGGAAAAAT GTTCGGCTTT
GCGCATGTTC AGACTTTCAC GCCAACTCGT TGGCTCAACG ATGGTGATAC GGTCAAGCTG
GGTCATAGCA CCCTGACGGT GCGGCATTGT CCGGGCCACA CGCCGGGGCA TGTGGTGTTC
TATTCGAGTG AAGCCAATCG CGCCTTTGTC GGGGATGTAT TGTTTGCGGG CTCGATCGGC
CGTACGGACT TGCCCCAAGG CGACCATGAC ACCCTGATCG CCAGTATCAC GCAGCGTCTG
TGGCCCATGG GTAATGACAC TGTATTTGTT CCAGGCCATG GACCCGAGAG CACCTTCGGG
ATTGAGCGGC GCAGCAACCC CTACGTGCGG GACACATAA
 
Protein sequence
MLRYLTVPVT PYQQNCSLLW CDQTMKTAVL DPGGDLERVL AQVARAGLVL DQIWLTHGHI 
DHAGGAAELA LRFGLPIIGP HQADQFLIDG LALQGKMFGF AHVQTFTPTR WLNDGDTVKL
GHSTLTVRHC PGHTPGHVVF YSSEANRAFV GDVLFAGSIG RTDLPQGDHD TLIASITQRL
WPMGNDTVFV PGHGPESTFG IERRSNPYVR DT