| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0165 |
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| Symbol | |
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| ID | 3960167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 164145 |
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| End bp | 165929 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915001 |
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| Product | putative bifunctional OHCU decarboxylase/allantoate amidohydrolase |
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| Protein accession | YP_521455 |
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| Protein GI | 89898984 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
[COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family
[TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTC CACCTTTGAC TTTGGACCAA CTTAACGCAG CCTCGCTGGA CGACGCCCGC
GCCATGGTCG CCGGCCTGTA CGAGCACTCC CCCTGGATTG CCCGCGCGGC CCTGCAGCAG
CGTCCCTTCC GGTCGCTGGC GCAGTTCAAA TATGCGCTCT GCCAGGTGGC GACGAATGCC
GGCAAGGACG CACAACTCGC ACTTCTGCGC GCCCACCCTG AGCTGGCGGG CAGGGCCTTG
GCGGACAAGA GCCTCACCGT CGAATCCACC CATGAGCCGA ACAAGGCAGG TCTCACGCAC
TGCACGCCCG CTGAATTTGA AAAGATCCAG CAGCTCAACA GTGACTACAA CGCCAGGTTT
GGTTTTCCCT TTATTCTCGC GCTGCGTGGG CCGCGCGGTC TGGGGTTGCA AAAAGCCGAG
ATCATGGCCA CCTTTGAGCG GCGACTGCAG AGTCACCCTG ACCATGAGTT TCAGGAAGGC
TTGCGAAATG TGCACCGCAT GGCCGAGATT CGCCTCAACG ACAGGTTCGG TAGGTCGATT
GAGCGTGGCA ATTTGGTATG GGACTGGCAG GAAGCCCTGG CGCAGTACAG CGACCCCGGC
TACGCCGAAC TGGGCCAGCT CACCGTCACC TACCTCACCG ACGCCCACCG CGCCTGCGCA
CAGCGCATCA GCAACAACAT GCGTGAGGCC GGATGCGACA AAGTGCATAT CGACGCTGTA
GGGAATGTGG TGGGGCGCTA CAAGGGCACG GGCGCAAGCC CCAAGGCCCT GATGACCGGC
AGTCACTATG ACACCGTGCG CAATGGAGGT AAGTATGACG GACGCCTGGG TATCTTTGTG
CCGCTGGCTT GCGTGCAAGG GCTTAAAAGA GCCAACAAGC GCCTGCCCTT CGATCTGGAA
ATCATTGCCT TTGCTGAAGA AGAGGGCCAG CGCTACAAAG CCACTTTTCT CGGCTCCGGC
GCGCTCACCG GTGACTTCAA GCCCGATTGG CTCGATCAGG TGGATGCCGA TGGCATCAGC
ATGCGCCAGG CCATGAAACA GGCGGGGCTC TGCATTGACG ACATCCCCAA GCTCAAGCGC
ATTGCCTCTG ACTACATGGG CTTTGTGGAA GTGCATATCG AGCAAGGGCC GGTGCTGAGC
GAGTTGAACT TGCCGCTGGG CATCGTCACC TCTATCAACG CCAGCGTGCG CCATACCGGC
GAAATGCTGG GCATGACCAG CCATGCTGGA ACCACGCCAA TGGACCGCCG CCGCGATGCG
GCTGCAGGTG TCGCCGAGCT GATGCTCTAC GTCGAAAGCC GTGCCGCTGC CGACAGCGAT
TCGGTGGGCA CCGTAGGTAT CCTGAATGTG CCTGGCGGCT CCATCAACGT GGTGCCCGGG
CGCTGCCAGT TCTCGCTGGA CTTGCGCGCA CCCACCGATG CGCAACGCGA TGCCATGGCC
AGCGATGTGC TGGCAAGAAT TGAGCAAATA GCCAAGGCAC GCGGCCTGCA TTACCACCTG
ACCGAGACCC TGCGTGCCAG CGCCGCCCCC AGCGCTCCCG CCTGGCAGCA ACGCTGGGAA
GCTGCGGTCG CAGCGCTGGG CCTGCCGCTG CACCGCATGC CCAGCGGCGC GGGCCATGAC
GCCATGAAGC TGCACGACCT TCTGCCCCAG GCCATGCTGT TTGTACGCGG TGAGAACGCA
GGCATCAGCC ACAACCCGCT GGAGTCCACC AGCAGCGACG ACATGCAGCT TGCCGTGCAA
GCGTTTGAAC ACCTTCTCAA CTCTCTGGCG CAAGAGCTAA GCTGA
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| Protein sequence | MATPPLTLDQ LNAASLDDAR AMVAGLYEHS PWIARAALQQ RPFRSLAQFK YALCQVATNA
GKDAQLALLR AHPELAGRAL ADKSLTVEST HEPNKAGLTH CTPAEFEKIQ QLNSDYNARF
GFPFILALRG PRGLGLQKAE IMATFERRLQ SHPDHEFQEG LRNVHRMAEI RLNDRFGRSI
ERGNLVWDWQ EALAQYSDPG YAELGQLTVT YLTDAHRACA QRISNNMREA GCDKVHIDAV
GNVVGRYKGT GASPKALMTG SHYDTVRNGG KYDGRLGIFV PLACVQGLKR ANKRLPFDLE
IIAFAEEEGQ RYKATFLGSG ALTGDFKPDW LDQVDADGIS MRQAMKQAGL CIDDIPKLKR
IASDYMGFVE VHIEQGPVLS ELNLPLGIVT SINASVRHTG EMLGMTSHAG TTPMDRRRDA
AAGVAELMLY VESRAAADSD SVGTVGILNV PGGSINVVPG RCQFSLDLRA PTDAQRDAMA
SDVLARIEQI AKARGLHYHL TETLRASAAP SAPAWQQRWE AAVAALGLPL HRMPSGAGHD
AMKLHDLLPQ AMLFVRGENA GISHNPLEST SSDDMQLAVQ AFEHLLNSLA QELS
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