| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0163 |
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| Symbol | |
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| ID | 3960165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 162688 |
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| End bp | 163332 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637914999 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_521453 |
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| Protein GI | 89898982 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.784261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCAGT TTTCTCTCTG GGACATCTTC ACCTTTTTGC TGGGGGCGCT GCGCTGGACG
GCGGCGCTCT CGCTGATTGC CTTCATTGGC GGTGGCCTGG TTGGCCTGGG CCTGCTCATG
CTGCGCTTTG CCAAGCTGCG CGGCGCGGCC ACGGCGGTAG CCTGGTATGT GCAAATCTTT
CAGGGCACGC CGCTCTTGAT GCAGCTCTTT CTGGTCTACT TTGGTCTAGC CCTGCTGGGC
ATGGACACCT CGCCATTGGT GGCGGCGGCG ATTTGCCTCA CCTTGTATGC CAGTGCCTAC
CTGACCGAAA TCTGGCGCGG TTGCGTCAAC GCCATTCCAA AAGGCCAGTG GGAAGCCTCC
ACCAGCCTGG CGCTGAACTT TACCCAGCAG ATGCGCCATG TGATCCTGCC GCAGGCGCTG
CACGTGGCGA TTGCACCCAC GGTGGGCTTT CTGGTGCAGA TCATCAAGGG CACGGCGCTG
GCCTCGGTGA TCGGCTTTGT GGAGCTGACC AAGGCCGGGC AGATGATCTC CAACGCCACC
TACCAACCGT TTCTGGCCTA CATCTTTGTG GGTCTTCTGT ACTTTGCCCT GTGCTACCCG
CTGTCGTGGT GGAGCCAGCG GCTGGAAAAC CGCCGTTTGG CCTGA
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| Protein sequence | MVQFSLWDIF TFLLGALRWT AALSLIAFIG GGLVGLGLLM LRFAKLRGAA TAVAWYVQIF
QGTPLLMQLF LVYFGLALLG MDTSPLVAAA ICLTLYASAY LTEIWRGCVN AIPKGQWEAS
TSLALNFTQQ MRHVILPQAL HVAIAPTVGF LVQIIKGTAL ASVIGFVELT KAGQMISNAT
YQPFLAYIFV GLLYFALCYP LSWWSQRLEN RRLA
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