Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0158 |
Symbol | |
ID | 3960160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 157597 |
End bp | 158868 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637914994 |
Product | allantoate amidohydrolase |
Protein accession | YP_521448 |
Protein GI | 89898977 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCAC CACAGATCAA CGCAGGGCGC CTACTAGCCA GCCTGCACGC GCTGGGCCAG ATCGGTGCGC TGCCCGGCGG CGGTGTCAAC CGCCTGGCCC TGAGTGATGC CGACCGCGAG GGGCGCGACT GGACCGTGGC ACGCATGCGT GAGCTGAGCA TGCGCGTCGA CATCGACGCC ATCGGCAACA TCGTCGGCAC CTTCCCCGGC ACCGAAGACC TGCCCCCGGT GATGGTGGGC TCGCATATCG ACACCGTGCG CACCGGCGGC CTGTATGACG GCAACTACGG CGTGCTGTCT GGCCTGGAAG TGGTGACCGC GCTGCGCGAG GCGGGCGTCC AGCCCCGCCG CCCGCTGGCC GTGGCCGTGT TCACCAACGA AGAAGGCGCA CGCTTCCAGC CCGACATGAT GGGCAGCCTG GTCTATGTCG GCGGCCTGCC CCTACCAGAC GCGCTAGCCA CCTGCGATGC CGACGGTGTG TCGGTGCAGG CCGAGCTGCA ACGCATCGGC TACCAGGGCA CAGCCCCGGT TGGCGCACCG CTGGTGGATA GCTATGTGGA GTTGCACATC GAGCAAGGTC CGGTGCTGGA ACAACTGGGC TTGCAGATCG GTGTGGTCGA AGGTGTGCAA GGTATCTCAT GGACCGAGTT CACCGTGGAG GGCCAGTCCA ACCACGCTGG CACCACGCCC ATGGCGCTGC GCCACGATGC CGCGCTGGTG GCCGCACAGG TGGCGGTGTT TATGCGCGCA CTGAGCGCAC GCCTGGGTGG CCGCCAACTG GCCACCGTGG GTGCGGTGCG GCTCAGTCCG AACCTGGTCA ACGTCATCGC GCAAAAGGCC GTGTTCACCG TGGACCTGCG CAACACCGAC AGCGCCGCGC TGGCCCAAGC CGAAAGCGAT TTACACGCCT ACGCCCAGCA AGCCGCGCAG GCCGAGGGTG TGCGCATCAC CAGCCGCACG CTGGCCCGCT TTGAGCCCGT GGCCTTTGAC CCCATGGTGG TCAATCTGGT GGAGCAGCAA ACCCAAGCCC TGGGCTGCAC TTACCAGCGT ATGCCCAGCG GCGCCGGGCA CGACGCGCAA ATGCTGGCCC GCGTCTGCCC CAGCGCCATG GTCTTTGTGC CCAGCGTGGG CGGCCTCAGC CACAACGTGC GCGAGCACAC AGCACCCGCC GACCTGCAAC GCGGCGCGCA AGTGCTGCTG CAAGTGGTGC TGGCGCTGGC CAACCGACCT TCCCAACTTC TACCCTTGAA CTTCTATGCC CCGCTACCTT AA
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Protein sequence | MTSPQINAGR LLASLHALGQ IGALPGGGVN RLALSDADRE GRDWTVARMR ELSMRVDIDA IGNIVGTFPG TEDLPPVMVG SHIDTVRTGG LYDGNYGVLS GLEVVTALRE AGVQPRRPLA VAVFTNEEGA RFQPDMMGSL VYVGGLPLPD ALATCDADGV SVQAELQRIG YQGTAPVGAP LVDSYVELHI EQGPVLEQLG LQIGVVEGVQ GISWTEFTVE GQSNHAGTTP MALRHDAALV AAQVAVFMRA LSARLGGRQL ATVGAVRLSP NLVNVIAQKA VFTVDLRNTD SAALAQAESD LHAYAQQAAQ AEGVRITSRT LARFEPVAFD PMVVNLVEQQ TQALGCTYQR MPSGAGHDAQ MLARVCPSAM VFVPSVGGLS HNVREHTAPA DLQRGAQVLL QVVLALANRP SQLLPLNFYA PLP
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