Gene Rfer_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0158 
Symbol 
ID3960160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp157597 
End bp158868 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content67% 
IMG OID637914994 
Productallantoate amidohydrolase 
Protein accessionYP_521448 
Protein GI89898977 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01879] amidase, hydantoinase/carbamoylase family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAC CACAGATCAA CGCAGGGCGC CTACTAGCCA GCCTGCACGC GCTGGGCCAG 
ATCGGTGCGC TGCCCGGCGG CGGTGTCAAC CGCCTGGCCC TGAGTGATGC CGACCGCGAG
GGGCGCGACT GGACCGTGGC ACGCATGCGT GAGCTGAGCA TGCGCGTCGA CATCGACGCC
ATCGGCAACA TCGTCGGCAC CTTCCCCGGC ACCGAAGACC TGCCCCCGGT GATGGTGGGC
TCGCATATCG ACACCGTGCG CACCGGCGGC CTGTATGACG GCAACTACGG CGTGCTGTCT
GGCCTGGAAG TGGTGACCGC GCTGCGCGAG GCGGGCGTCC AGCCCCGCCG CCCGCTGGCC
GTGGCCGTGT TCACCAACGA AGAAGGCGCA CGCTTCCAGC CCGACATGAT GGGCAGCCTG
GTCTATGTCG GCGGCCTGCC CCTACCAGAC GCGCTAGCCA CCTGCGATGC CGACGGTGTG
TCGGTGCAGG CCGAGCTGCA ACGCATCGGC TACCAGGGCA CAGCCCCGGT TGGCGCACCG
CTGGTGGATA GCTATGTGGA GTTGCACATC GAGCAAGGTC CGGTGCTGGA ACAACTGGGC
TTGCAGATCG GTGTGGTCGA AGGTGTGCAA GGTATCTCAT GGACCGAGTT CACCGTGGAG
GGCCAGTCCA ACCACGCTGG CACCACGCCC ATGGCGCTGC GCCACGATGC CGCGCTGGTG
GCCGCACAGG TGGCGGTGTT TATGCGCGCA CTGAGCGCAC GCCTGGGTGG CCGCCAACTG
GCCACCGTGG GTGCGGTGCG GCTCAGTCCG AACCTGGTCA ACGTCATCGC GCAAAAGGCC
GTGTTCACCG TGGACCTGCG CAACACCGAC AGCGCCGCGC TGGCCCAAGC CGAAAGCGAT
TTACACGCCT ACGCCCAGCA AGCCGCGCAG GCCGAGGGTG TGCGCATCAC CAGCCGCACG
CTGGCCCGCT TTGAGCCCGT GGCCTTTGAC CCCATGGTGG TCAATCTGGT GGAGCAGCAA
ACCCAAGCCC TGGGCTGCAC TTACCAGCGT ATGCCCAGCG GCGCCGGGCA CGACGCGCAA
ATGCTGGCCC GCGTCTGCCC CAGCGCCATG GTCTTTGTGC CCAGCGTGGG CGGCCTCAGC
CACAACGTGC GCGAGCACAC AGCACCCGCC GACCTGCAAC GCGGCGCGCA AGTGCTGCTG
CAAGTGGTGC TGGCGCTGGC CAACCGACCT TCCCAACTTC TACCCTTGAA CTTCTATGCC
CCGCTACCTT AA
 
Protein sequence
MTSPQINAGR LLASLHALGQ IGALPGGGVN RLALSDADRE GRDWTVARMR ELSMRVDIDA 
IGNIVGTFPG TEDLPPVMVG SHIDTVRTGG LYDGNYGVLS GLEVVTALRE AGVQPRRPLA
VAVFTNEEGA RFQPDMMGSL VYVGGLPLPD ALATCDADGV SVQAELQRIG YQGTAPVGAP
LVDSYVELHI EQGPVLEQLG LQIGVVEGVQ GISWTEFTVE GQSNHAGTTP MALRHDAALV
AAQVAVFMRA LSARLGGRQL ATVGAVRLSP NLVNVIAQKA VFTVDLRNTD SAALAQAESD
LHAYAQQAAQ AEGVRITSRT LARFEPVAFD PMVVNLVEQQ TQALGCTYQR MPSGAGHDAQ
MLARVCPSAM VFVPSVGGLS HNVREHTAPA DLQRGAQVLL QVVLALANRP SQLLPLNFYA
PLP