Gene Rfer_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0150 
Symbol 
ID3960559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp151079 
End bp152194 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content62% 
IMG OID637914987 
Productputative DNA alkylation repair enzyme 
Protein accessionYP_521441 
Protein GI89898970 
COG category[L] Replication, recombination and repair 
COG ID[COG4335] DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAC CACTCAAAAC CCAATTCGGC ACGGAGGTCC CCGTGCGGAT CGCCGCAATG 
ATCTCGCGCG CATGGCACGC CTTCGACCAG GATGCGTTCC TCAAGGATGC GCTGGACGGA
TACACATCGC TTGAGCTGAT GCCGCGCGGG CGCTGGATTG CGCAGGCGCT GCATCGGCAT
CTGCCGCAGG ACTATGAGGT CGCGCTTGCG GTCTTGATGG ACTCCATCGG GCCAAAGCTG
GACGGCACGG AAGACTTTGG GATGGCCTCT TTTTTCTACC TCCCGCACAC CTGTTTTGTG
GCGGCCTTTG GGCTGGATCA CTTTGAGGTT TCGATGCGCG CCCAGTACGA GTTGACGCAG
CGCTTCACTG CCGAGTTCAG CATTCGCCCG TTTCTGGAGC GGCATCCGCA GGCCACCCTG
TCGCGCTTGA AGGACTGGGC CAGCGACCCG AGCCCGCATG TGCGCCGCCT GGTGTCGGAG
GGCACGCGCC CTCGCTTGCC GTGGGCACTC CGCCTGCGCG CCTTTCAGCA AGACCCGCAG
CCCGTGCTGG CGCTGCTGGA GCTGTTGAAA GACGATCCTG AACTCTATGT GCGTCGTTCT
GTTGCCAACA GCTTGAACGA CATCGGCAAA GACCATCCCT TGTTGCTGGT GGAGACGGCA
CGCCGCTGGC TGGTGGATGC GCCGGATGAA CGGCGCTGGC TGGTGCAGCA TGCGCTGCGC
TCGGCCGTGA AACGTGGCGA GGCTGGTGCG CTTGGCGTGC TGGGCTTCGG GGTTAGCGCG
ATGGTGTCGG TCAGCGGGGC ACGCATCGCC CCCCAGCGCG TGGTGATGGG GGGAGCAGTG
ACCATTGCCT TTGACGTGTG CAACACAGAA TCACGTCCGC AGCGGGCGCT GGTGGACTTG
CGCGTTCACT TCGTCAAGGC CAACGGCAAG AGCAGTCCCA AGGTATTCAA GTTGAAGGTG
CTTGACCTCC AGCAGCAGAC CACCGTACGG CTGAGCAAAA CGATTTCCTT GGTAGTGATG
ACAACGCGAA AACACTACCC AGGCGTGCAC CAGGTGGATG TCGTCATCAA CGGAACCACT
CAGGCGCTGG GGCAATTTGA ACTCGCCCAT GATTGA
 
Protein sequence
MAEPLKTQFG TEVPVRIAAM ISRAWHAFDQ DAFLKDALDG YTSLELMPRG RWIAQALHRH 
LPQDYEVALA VLMDSIGPKL DGTEDFGMAS FFYLPHTCFV AAFGLDHFEV SMRAQYELTQ
RFTAEFSIRP FLERHPQATL SRLKDWASDP SPHVRRLVSE GTRPRLPWAL RLRAFQQDPQ
PVLALLELLK DDPELYVRRS VANSLNDIGK DHPLLLVETA RRWLVDAPDE RRWLVQHALR
SAVKRGEAGA LGVLGFGVSA MVSVSGARIA PQRVVMGGAV TIAFDVCNTE SRPQRALVDL
RVHFVKANGK SSPKVFKLKV LDLQQQTTVR LSKTISLVVM TTRKHYPGVH QVDVVINGTT
QALGQFELAH D