| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0135 |
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| Symbol | |
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| ID | 3960234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 138799 |
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| End bp | 139707 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637914972 |
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| Product | peptidase U32 |
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| Protein accession | YP_521426 |
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| Protein GI | 89898955 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.903367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAG CTTTAGGTCC GATCCTGTAC TACTGGCCGC GCGACGAGGT GCTGGCTTTT
TATGACGCCG TGGCGCAGTC GCCGGTGGAC ATCGTCTACC TGGGTGAAGC GGTGTGTTCG
CGCCGCCACG AGGTGCGGCT CAATGACTGG CTGGACATTG CCGCCGCTTT GCGCGATGCG
GGTAAAGAAG TGGTGCTGTC GACCCAGGTG CTGATCGAGT CCGGCGCCGA TGTGACGGTG
TTGCACAAAA TTGCTGCCAA CGGTCAATTC ATGGTCGAGG CCAACGACAT GGGTGCAGTG
CACTGCCTGG AAGGCAAAGT GCCTTTTGTC GCCGGGCCGC ACCTGAACAT CTACAACGTG
CCGACGCTGC AATGGATGGC GGCTCTGGGC ATCAAGCGCT GGGTGATGCC GCTGGAGATG
GGGCGCGATG ATCTGGCGCT GCTGCTGGCC GGTTGCCCGC CGGGTGTGCA AACCGAGGTG
TTTGCCTATG GCCGCATGCC GCTGGCCTTT TCTGCCCGCT GTTTCACCGC GCGCCACTGC
AATTTGCCCA AGGACGATTG CCAGTTCAAA TGTATTGAGC ACCCGGATGG TTTGGTGATG
CGCACGCGCG AGAGCGAAGA GTTTCTGGTG CTCAACGGCA TCCAGACCCA ATCGGCCCGC
GTCCACAACC TGCTGGCGGA GTTGCCGGCC ATGCGGGACA TGGGCGTGGA TGTGGTGCGT
ATCAGCCCGC AGTCGCGGCA TACGGTGCGC ATTGTCGAGC TGTTCCAAGC GGTGATCCAG
GGCCGGATGG GCGTGACTGC GGCCAGCACT GAACTGGCCG CGCTGATGCC GGAAAAAGCC
TGCAATGGCT ACTGGTACGG CCAGCCGGGG CTGGAGCAGG TCGCTGCAAG CCCGGAACAG
GTGTCCTAG
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| Protein sequence | MKLALGPILY YWPRDEVLAF YDAVAQSPVD IVYLGEAVCS RRHEVRLNDW LDIAAALRDA
GKEVVLSTQV LIESGADVTV LHKIAANGQF MVEANDMGAV HCLEGKVPFV AGPHLNIYNV
PTLQWMAALG IKRWVMPLEM GRDDLALLLA GCPPGVQTEV FAYGRMPLAF SARCFTARHC
NLPKDDCQFK CIEHPDGLVM RTRESEEFLV LNGIQTQSAR VHNLLAELPA MRDMGVDVVR
ISPQSRHTVR IVELFQAVIQ GRMGVTAAST ELAALMPEKA CNGYWYGQPG LEQVAASPEQ
VS
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