Gene Rfer_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0132 
Symbol 
ID3960231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp136207 
End bp137691 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content63% 
IMG OID637914969 
Productcarboxylyase-like protein 
Protein accessionYP_521423 
Protein GI89898952 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTACC GCGACCTCAG AGACTTCATC ACCCAACTGG AACACCTGGG CGAACTCAAG 
CGCGTCCAGG CCGAGGTTTC GCCTTATCTG GAGATGACCG CCCTGTGCGA CCGCACCTTG
CGCGCGGGCG GCCCGGCCTT GCTGTTTGAA AACCCCACCG GCCACAACAC GCCGGTGCTG
GGCAACCTGT TTGGCACGAC ACGCCGCGTC GCTTTGGGCA TGGGCGTAAA CGACGTGAGT
GAGCTGCGCC AGTTTGGCCA CGTGCTGGCC AGTCTCAAGG AGCCCGAAGC CCCCAAAGGT
TTCAAGGAGC TGATGGGCCT GGGCAGCCTG GTCAAAACCC TGTGGGCCAT GGCTCCCAAA
GAACTGCGTA GCGCACCGTG CCAGGAAATT ATCTGGGAAG GGGCGGACGT CGATTTGGCA
AGGCTGCCGA TTCAACATTG CTGGCCCGGC GATGTAGCCC CGCTGATCAC CTGGGGCCTG
GTGATCACCC AAGGCCCGCA CAAGGCACGA CAAAACCTGG GCATTTACCG CCAACAGGTA
CTGGCCCGCA ACAAGGTCAT CATGCGCTGG TTGGCCCAGC GCGGTGGCGC GCTGGATTTC
AAAGAGCACG CGGCCCTGAA CCCCGGCCAG CCCTACCCGG TCTGCGTGGC CCTGGGTGCC
GACCCGGCCA CGATTCTGGG AGCGGTCACG CCGGTGCCCG ACTCTTTGAG CGAATACCAG
TTTGCCGGGT TGCTGCGTGG CAGCCGCACC GAGCTGGTCA AAGCCCTGGG CAGCGAGCTG
CGCGTACCCG CCTTTGCCGA AATCGTGCTC GAAGGCCACA TCTACCCGGA CGCCACGCAC
GCCAGCGGTT TCGAGCACGC GCTGGAAGGC CCGTTTGGCG ACCACACCGG TTATTACAAC
GAACAGGACT GGTTTCCGGT CTTCACCATC GACCGCATCA CGCAGCGTCG CGACCCCATT
TACCACTCGA CTTACACCGG CAAACCGCCC GATGAGCCCG CCATGCTGGC GCTGGCTTTG
AACGAGCTGT TTGTGCCGTT GCTGCAACGC CAATACCCCG AGATCACCGA CTTCTATCTG
CCGCCCGAGG GCTGCAGTTA CCGCCTGGCC GTGGTGCAGA TCAAGAAGTC CTACCCCGGC
CACGCGCGCC GTGTCATGTT TGGCATCTGG AGCTTTCTGC GCCAGTTCAT GTACACCAAG
TTCATCGTGG TGGTCGATGA CGACGTCAAC ATCCGTGACT GGAAGGACGT GATCTGGGCC
ATCACCACCC GGGTCGACCC GACACGCGAC ACGCTCCTGG CCGACAGCAC ACCGATTGAC
TACCTGGACT TTGCCTCACC GGTGAGCGGC CTGGGCAGCA AGATGGGGCT GGATGCCACC
AACAAATGGC CGGGCGAGAC CAGCCGGGAA TGGGGCCGGC CATTGACCAT GAGTGCCGAC
GTCACGGCCA GGGTGGAGCA GGTTTGGCAG ACGCTGGGAC TGTGA
 
Protein sequence
MAYRDLRDFI TQLEHLGELK RVQAEVSPYL EMTALCDRTL RAGGPALLFE NPTGHNTPVL 
GNLFGTTRRV ALGMGVNDVS ELRQFGHVLA SLKEPEAPKG FKELMGLGSL VKTLWAMAPK
ELRSAPCQEI IWEGADVDLA RLPIQHCWPG DVAPLITWGL VITQGPHKAR QNLGIYRQQV
LARNKVIMRW LAQRGGALDF KEHAALNPGQ PYPVCVALGA DPATILGAVT PVPDSLSEYQ
FAGLLRGSRT ELVKALGSEL RVPAFAEIVL EGHIYPDATH ASGFEHALEG PFGDHTGYYN
EQDWFPVFTI DRITQRRDPI YHSTYTGKPP DEPAMLALAL NELFVPLLQR QYPEITDFYL
PPEGCSYRLA VVQIKKSYPG HARRVMFGIW SFLRQFMYTK FIVVVDDDVN IRDWKDVIWA
ITTRVDPTRD TLLADSTPID YLDFASPVSG LGSKMGLDAT NKWPGETSRE WGRPLTMSAD
VTARVEQVWQ TLGL