Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0132 |
Symbol | |
ID | 3960231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 136207 |
End bp | 137691 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637914969 |
Product | carboxylyase-like protein |
Protein accession | YP_521423 |
Protein GI | 89898952 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTACC GCGACCTCAG AGACTTCATC ACCCAACTGG AACACCTGGG CGAACTCAAG CGCGTCCAGG CCGAGGTTTC GCCTTATCTG GAGATGACCG CCCTGTGCGA CCGCACCTTG CGCGCGGGCG GCCCGGCCTT GCTGTTTGAA AACCCCACCG GCCACAACAC GCCGGTGCTG GGCAACCTGT TTGGCACGAC ACGCCGCGTC GCTTTGGGCA TGGGCGTAAA CGACGTGAGT GAGCTGCGCC AGTTTGGCCA CGTGCTGGCC AGTCTCAAGG AGCCCGAAGC CCCCAAAGGT TTCAAGGAGC TGATGGGCCT GGGCAGCCTG GTCAAAACCC TGTGGGCCAT GGCTCCCAAA GAACTGCGTA GCGCACCGTG CCAGGAAATT ATCTGGGAAG GGGCGGACGT CGATTTGGCA AGGCTGCCGA TTCAACATTG CTGGCCCGGC GATGTAGCCC CGCTGATCAC CTGGGGCCTG GTGATCACCC AAGGCCCGCA CAAGGCACGA CAAAACCTGG GCATTTACCG CCAACAGGTA CTGGCCCGCA ACAAGGTCAT CATGCGCTGG TTGGCCCAGC GCGGTGGCGC GCTGGATTTC AAAGAGCACG CGGCCCTGAA CCCCGGCCAG CCCTACCCGG TCTGCGTGGC CCTGGGTGCC GACCCGGCCA CGATTCTGGG AGCGGTCACG CCGGTGCCCG ACTCTTTGAG CGAATACCAG TTTGCCGGGT TGCTGCGTGG CAGCCGCACC GAGCTGGTCA AAGCCCTGGG CAGCGAGCTG CGCGTACCCG CCTTTGCCGA AATCGTGCTC GAAGGCCACA TCTACCCGGA CGCCACGCAC GCCAGCGGTT TCGAGCACGC GCTGGAAGGC CCGTTTGGCG ACCACACCGG TTATTACAAC GAACAGGACT GGTTTCCGGT CTTCACCATC GACCGCATCA CGCAGCGTCG CGACCCCATT TACCACTCGA CTTACACCGG CAAACCGCCC GATGAGCCCG CCATGCTGGC GCTGGCTTTG AACGAGCTGT TTGTGCCGTT GCTGCAACGC CAATACCCCG AGATCACCGA CTTCTATCTG CCGCCCGAGG GCTGCAGTTA CCGCCTGGCC GTGGTGCAGA TCAAGAAGTC CTACCCCGGC CACGCGCGCC GTGTCATGTT TGGCATCTGG AGCTTTCTGC GCCAGTTCAT GTACACCAAG TTCATCGTGG TGGTCGATGA CGACGTCAAC ATCCGTGACT GGAAGGACGT GATCTGGGCC ATCACCACCC GGGTCGACCC GACACGCGAC ACGCTCCTGG CCGACAGCAC ACCGATTGAC TACCTGGACT TTGCCTCACC GGTGAGCGGC CTGGGCAGCA AGATGGGGCT GGATGCCACC AACAAATGGC CGGGCGAGAC CAGCCGGGAA TGGGGCCGGC CATTGACCAT GAGTGCCGAC GTCACGGCCA GGGTGGAGCA GGTTTGGCAG ACGCTGGGAC TGTGA
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Protein sequence | MAYRDLRDFI TQLEHLGELK RVQAEVSPYL EMTALCDRTL RAGGPALLFE NPTGHNTPVL GNLFGTTRRV ALGMGVNDVS ELRQFGHVLA SLKEPEAPKG FKELMGLGSL VKTLWAMAPK ELRSAPCQEI IWEGADVDLA RLPIQHCWPG DVAPLITWGL VITQGPHKAR QNLGIYRQQV LARNKVIMRW LAQRGGALDF KEHAALNPGQ PYPVCVALGA DPATILGAVT PVPDSLSEYQ FAGLLRGSRT ELVKALGSEL RVPAFAEIVL EGHIYPDATH ASGFEHALEG PFGDHTGYYN EQDWFPVFTI DRITQRRDPI YHSTYTGKPP DEPAMLALAL NELFVPLLQR QYPEITDFYL PPEGCSYRLA VVQIKKSYPG HARRVMFGIW SFLRQFMYTK FIVVVDDDVN IRDWKDVIWA ITTRVDPTRD TLLADSTPID YLDFASPVSG LGSKMGLDAT NKWPGETSRE WGRPLTMSAD VTARVEQVWQ TLGL
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