Gene Rfer_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0115 
Symbol 
ID3962816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp116778 
End bp117476 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID637914953 
ProductDSBA oxidoreductase 
Protein accessionYP_521407 
Protein GI89898936 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.133072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTTT CAACGACAAC ACACCAGGCT CGCATCATGT CCCGTCCCCT GAAAATCGAT 
TTCGTCTCCG ACATTTCCTG CCCGTGGTGC GCCATCGGTT TGTCGGCACT GGAGCAGGCG
CTGGACCGGC TGCAGAACGA GGTTGCCGCT GAACTGCATT TCCAGCCGTT CGAACTCAAC
CCCCAAATGC CCGCCGGTGG TCAAGACATC GGCGAGCATC TGGCGCAGAA GTACGGCTCC
ACGCCCGAGC AGCAGACGCA GATTCGCGAC ACCATTCGCC AGCGCGGGGC CGAGGTCGGT
TTCAGTTTCA ACCCCGCCGG GCGCGGCCGC ATCTACAACA CCTTTGACGC GCACCGCTTG
CTGCACTGGG CCGGACTCGA AACACCGAGC CGGCAACCCG CGCTGAAGAA AGCGCTGCTG
GTGGCCTGCC ATAGCCAGGG CCAAAATATG GAGTCGCACG AGGTTTTGCT GGCTGCGGTG
GCGCAGGCGG GTCTGGACGT GGCGCGCGCA CGCGCCATTC TGGCCAGCGA CGAATTCGCC
CCCGAGGTGC GCGAGCGCGA AGCGTTCTAC ACCAGCCAGG GCATCCACTC GGTGCCGACG
GTCATCATCA ACGATCGGCA TCTGATCTCC GGTGGTCAGC CGGTAGCGGT GTTCGAGCAG
GCGCTGCGCC AGATCGCGGC GAATCAGCCG GGCGACTGA
 
Protein sequence
MRLSTTTHQA RIMSRPLKID FVSDISCPWC AIGLSALEQA LDRLQNEVAA ELHFQPFELN 
PQMPAGGQDI GEHLAQKYGS TPEQQTQIRD TIRQRGAEVG FSFNPAGRGR IYNTFDAHRL
LHWAGLETPS RQPALKKALL VACHSQGQNM ESHEVLLAAV AQAGLDVARA RAILASDEFA
PEVREREAFY TSQGIHSVPT VIINDRHLIS GGQPVAVFEQ ALRQIAANQP GD