Gene Rfer_0105 details

Gene Information

• Locus tag: Rfer_0105
• Symbol: atpC
• ID: 3962806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 107821
• End bp: 108237
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637914943
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_521397
• Protein GI: 89898926
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0907989
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACCA TCCACGTTGA TGTGGTCAGT GCCGAAGAGT CCATCTTCTC CGGTGAGGCG 
CGCTTTGTCG CCTTGCCGGG GGAAGTCGGC GAGCTCGGCA TCTACCCGCG CCACACCCCG 
TTGATATCGC GCATCAAGGC GGGCTCGGTG CGCATTGAAA AAGCCGATGG GAGCGAAGAG 
TTTGTCTTTG TTGCCGGCGG TCTGCTCGAA GTGCAGCCCA ACTGTGTGAC GGTCTTGTCA 
GACACCGCCA TTCGCGGCAA GGATCTGGAC GAGGAAAAGG CCAACGCTGC CAAACTGGCC 
GCTGAAGAAG CCATGAAAAA TGCCAAGACC GATATTGATC TGGCACGGGC AACCTCCGAA 
CTGGCGGTGA TGGCAGCGCA GATTGCGGCG TTACGCAAGT ACCGTCAGAA AAAATAG 

 

Protein sequence

MNTIHVDVVS AEESIFSGEA RFVALPGEVG ELGIYPRHTP LISRIKAGSV RIEKADGSEE 
FVFVAGGLLE VQPNCVTVLS DTAIRGKDLD EEKANAAKLA AEEAMKNAKT DIDLARATSE 
LAVMAAQIAA LRKYRQKK