Gene Rfer_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0102 
Symbol 
ID3962803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp105632 
End bp106264 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content58% 
IMG OID637914940 
Producthypothetical protein 
Protein accessionYP_521394 
Protein GI89898923 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.95764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTT ATGCTAAGGT TGCGTTCTTC ACGCTGGAGA TTTATATGAC ACGCTGGCTC 
CTGATTCTGT TGACTGCCCT GTCCCTGACC GGCTGTGGCT ATAACGATTT TCAACGCCTG 
GACGAACAGA CCAAGTCGGC CTGGAGCGAG GTGCTCAATC AATACCAGCG CCGCGCTGAC 
CTGGTGCCCA ACATTGTGGC AACCGTCAAA GGCGAGGCCG CGTTTGAGCA GGAGACGCTG 
ACCAAGGTGA TTGAGGCGCG CGCCAAGGCG ACCTCGATCC AGGTGACGCC AGAAACCTTG 
AACAACCCGG AAGCCTTCAA CAAGTTTCAG GCGGCACAAG GCGAGCTGGG CTCGGCCTTG 
AGCCGCTTGA TGGCGGTGTC CGAACAGTAC CCCAGTCTCA AAGCCAACCA GGGCTTTTCG 
GATTTGCGGG TGCAGCTCGA AGGCACCGAA AACCGCGTCA CGGTGGCGCG CAACCGGTAT 
ATCCAGGCCG TCCAGGCGTA CAACGTGCTG GTGCGAAGTT TCCCCAGCAA CCTGACGGCG 
ATGGTCTTTA GCTACCAGCC AAAACCCAGC TTTACCGTGC AAAATGAAGC GGCGATCACA 
ACGCCGCCGG TGGTCGACTT CAACAAGAAG TAG
 
Protein sequence
MRVYAKVAFF TLEIYMTRWL LILLTALSLT GCGYNDFQRL DEQTKSAWSE VLNQYQRRAD 
LVPNIVATVK GEAAFEQETL TKVIEARAKA TSIQVTPETL NNPEAFNKFQ AAQGELGSAL 
SRLMAVSEQY PSLKANQGFS DLRVQLEGTE NRVTVARNRY IQAVQAYNVL VRSFPSNLTA 
MVFSYQPKPS FTVQNEAAIT TPPVVDFNKK