| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0093 |
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| Symbol | |
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| ID | 3960094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 94994 |
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| End bp | 97303 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637914931 |
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| Product | malic enzyme |
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| Protein accession | YP_521385 |
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| Protein GI | 89898914 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.351367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCATA CAACGGCCAC CGCCGCAGAC AAACGCGCTG AATTGCGCCG CGCCACACTC
GAGTACCACG AATTTCCCAC CCCCGGCAAA ATTTCCATTG CGCCGACCAA GCAGTTGATC
AACCAGCATG ATCTGGGGCT GGCCTACACG CCGGGCGTGG CCATTCCGTG CGAGGAAATC
GTCAAAGACC CGAATAACGC CTACAAGTAC ACCAGCCGGG GCAATCTGGT GGCGGTCGTC
ACCAACGGCA CCGCCGTGCT CGGACTGGGC GACATTGGCC CATTGGCGGG TAAACCGGTG
ATGGAAGGCA AGGCCGTGCT GTTCAAGAAG TTCGCCGGTA TTGATGTGTT CGACATCGAA
ATCAACGAAA AGCACGATCT TGACAAGCTG GTGGACATCA TCGCTTCGCT GGAGCCGACC
TTTGGCGGCA TCAACCTGGA AGACATCAAG GCACCCGACT GCTTTTATGT CGAGCGCAAG
TTGCGCGAAC GCATGAAGAT TCCGGTCTTT CATGATGACC AGCACGGTAC CGCCATCACG
GTCGGTGCGG CCATTCTCAA CGGCCTGAAA GTGGCCGGCA AGGACCCGAA AGACGTGAAA
CTGGTGACCT CCGGCGCCGG TGCCGCAGCG CTGGCTTGCG TCGGGCTGCT GGTCAAACTG
GGCATTCCCC GTGAAAACGT GTGGGTGACC GATCTGGCCG GTGTCGTGTA CGAGGGCCGC
ACCGAGCTGA TGGACCCGGA CAAGATCATT TACAGCCAGA AGACATCGGC GCGCACCCTG
GGTGAAGTCA TTGAAGGTGC TGACGTGTTT CTGGGCTTGT CAGCGGGCGG TGTGCTCAAG
GGCGAAATGG TCAAAAGGAT GGCGCCCAGG CCGATCATTT TTGCGCTCGC CAACCCGACG
CCCGAGATCA CGCCCGAAGA AGTGAAGGCC GTGCGCAGCG ACGCCATCAT CGGCACCGGC
CGCTCGGATT ACCCGAACCA GATCAACAAC ATCTTGTGTT TCCCCTACAT TTTCAGGGGC
GCACTGGACG CGGGCGCCTC CACCATCACG GTGGAGATGG AAATGGCGGC GGTGCATGCG
ATTGCCGACC TGGCGCAGGC CGAGCAAAGC GAAGTGGTTG CTGCCGCCTA TGTTGGCGAG
CCGCTGGCCT TTGGGCCGGA GTACCTGATC CCCAAGCCCT TTGATCCGCG TTTGATGATC
AAAGTGGCGC CAGCGGTGGC CCAGGCCGCG TTTGACAGCG GCGTGGCCTT GCGCCCGATT
GCGGACATGG ATGCCTACCG CGAGAAGTTG CAAAGCTTCG TCTACGCCTC GGGCACCGTG
ATGAAACCGA TTTTCGCCGC CGCGAAAAGT GCGCTTAAAA AGCGGATCGC CTATGCCGAG
GGTGAAGATG AACGTGTGCT GCGCGCGGCC CAGATTGTGG TGGACGAAGG CTTGGCCCTG
CCCACGCTGA TTGGCCGTCC GCTGGTGATT GCCGAGCGCA TCAATAAGTT TGGCTTACGC
CTGGAAGAGG GGCAGGACTA CAGCGTCGTC AATGTGGAGC AGGATCATCG CTACCGCGAT
TTCTGGCAAA CCTACCACCG CATGACCGAG CGCAAGGGCA TGACGGCCCA GGTTGCCAAG
ATCGAGATGC GCCGACGCCT GACCCTGATT GGCAGTATGT TGTTACAAAA GGGTGATGTG
GATGGGCTGA TTTGCGGCAC CTGGGGCACC ACGGCGATGC ACCTGCAATA TCTGGATCAG
GTGATTGGAA AACGCACTGG CGTCAACACC TATGCCTGCA TGAATTGCCT GATGTTGCCC
GAGCGCCAGC TATTTATAGT GGACACCCAC GTCAACTACG ATCCCACTGC CGAGCAACTG
GCCGAGATCA CAATTCTGGC GGCAGAGGAA ATGGTGCGCT TCGGCATTCG GCCCAAAGCC
GCCTTGCTGT CGCACTCCAA CTTTGGCAGC AGCAACCAAC CCAGCGCCGT GAAGATGCGC
GAGGCTTTGG ACTTGCTGCG GGTCAAGGCG CCGTGGCTGG AGGTGGACGG CGAAATGCAT
GGCGACGTGG CGCTCGATGG CGCAGCCCGC GCAGCCCTCA TGCCCAACAG CACACTGGCG
GGGGACGCCA ATCTTCTGGT GTTACCCAAT ATCGATGCCG CTAATATTGC CTACAACCTG
CTCAAGACAG CAGCCGGTGG CAATATCGCC GTTGGTCCGG TGCTGCTGGG CGCGGCCAAA
CCGGTGCATA TCTTGACCGC CAGTGCCACG GTGCGTCGAA TTGTGAATAT GACGGCCCTC
ACTGTGGCCG ACGCAAACGC CAGCCGCTGA
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| Protein sequence | MPHTTATAAD KRAELRRATL EYHEFPTPGK ISIAPTKQLI NQHDLGLAYT PGVAIPCEEI
VKDPNNAYKY TSRGNLVAVV TNGTAVLGLG DIGPLAGKPV MEGKAVLFKK FAGIDVFDIE
INEKHDLDKL VDIIASLEPT FGGINLEDIK APDCFYVERK LRERMKIPVF HDDQHGTAIT
VGAAILNGLK VAGKDPKDVK LVTSGAGAAA LACVGLLVKL GIPRENVWVT DLAGVVYEGR
TELMDPDKII YSQKTSARTL GEVIEGADVF LGLSAGGVLK GEMVKRMAPR PIIFALANPT
PEITPEEVKA VRSDAIIGTG RSDYPNQINN ILCFPYIFRG ALDAGASTIT VEMEMAAVHA
IADLAQAEQS EVVAAAYVGE PLAFGPEYLI PKPFDPRLMI KVAPAVAQAA FDSGVALRPI
ADMDAYREKL QSFVYASGTV MKPIFAAAKS ALKKRIAYAE GEDERVLRAA QIVVDEGLAL
PTLIGRPLVI AERINKFGLR LEEGQDYSVV NVEQDHRYRD FWQTYHRMTE RKGMTAQVAK
IEMRRRLTLI GSMLLQKGDV DGLICGTWGT TAMHLQYLDQ VIGKRTGVNT YACMNCLMLP
ERQLFIVDTH VNYDPTAEQL AEITILAAEE MVRFGIRPKA ALLSHSNFGS SNQPSAVKMR
EALDLLRVKA PWLEVDGEMH GDVALDGAAR AALMPNSTLA GDANLLVLPN IDAANIAYNL
LKTAAGGNIA VGPVLLGAAK PVHILTASAT VRRIVNMTAL TVADANASR
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