| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0089 |
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| Symbol | |
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| ID | 3960090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 91596 |
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| End bp | 92597 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637914927 |
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| Product | proline iminopeptidase |
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| Protein accession | YP_521381 |
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| Protein GI | 89898910 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACT CGAAGCCCAA GAAAGAACCC CCGCCCATGT CCGCCGACGC CCTCAATCCT
TTGTATCCGG CCATTGCGCC TTACCGCACG GGCCAACTGC CGGTCGATGA CATCCACACC
CTGTATTGGG AAGAGTGCGG CAACCCCGAC GGGGTGCCGG CGCTGTTTTT GCATGGCGGG
CCGGGGGCGG GCCTGTCACC CCAACACCGG CAATTCTTTG ACCCGGCGTA TTACCGCATC
GTGCTGTTTG ACCAACGCGG TGCCGGCCAA TCCACGCCGC TGGGGGAGGC GCTGGAAAAC
ACCACCGACC TGTTGATCCA CGACATTGAG CGCCTGCGCG AGCAGTTGGG CATCGCACAG
TGGCTGGTGT TTGGCGGCTC CTGGGGCTCG ACCCTGGCGC TGGCTTACGG TGAGGCGCAC
CCCGAGCGCT GCACCGGCTT TGTGCTGCGC GGTATTTTCT TGTGCACGCG CAGCGAGATC
GACTGGTTCC TGAACGGTAT CCGGCTATTT TTCCCGCAAG AACATGCCCG CTTTGTGGCC
GACATTCCCG AGACCGAGCG CGGCAATCTG CTGCAAGCCT ACGCCCGCCG CCTGTTCAGC
GGCAACCCGG CTGAAAACAT GCGGGCGGCG CGCACCTGGA GCCGCTACGA AGGCAGTTGC
CTGCACCTGC TGCCGCATCC GGAGGTGGCC GAGACGTTTG GCTCAGCCGC CGTTGGCCTG
GGGCTGGGCC GGCTGGAGGC GCACTACTTC CTGCACGACG CCTTTTTGAG CGAGGATCAG
TTGGTGCGCA ACGTGGACCG CATCCGCCAC CTGCCAGCCG TCATCATTCA GGGCCGCTAC
GACGTGGTGT GTCCGCCGGT GTCGGCGTGG CGGCTGCACG AAGCCTGGCC CGAGGCCTCT
TTTCAGATGA TTGAAGATGC CGGCCACGCC GCTTTTGAGC CGGGCATTGC CAGCGCACTG
ATCGCCGCGA CCAATCAGTT CAAGCGCGAC GGCACCTTGT AG
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| Protein sequence | MPNSKPKKEP PPMSADALNP LYPAIAPYRT GQLPVDDIHT LYWEECGNPD GVPALFLHGG
PGAGLSPQHR QFFDPAYYRI VLFDQRGAGQ STPLGEALEN TTDLLIHDIE RLREQLGIAQ
WLVFGGSWGS TLALAYGEAH PERCTGFVLR GIFLCTRSEI DWFLNGIRLF FPQEHARFVA
DIPETERGNL LQAYARRLFS GNPAENMRAA RTWSRYEGSC LHLLPHPEVA ETFGSAAVGL
GLGRLEAHYF LHDAFLSEDQ LVRNVDRIRH LPAVIIQGRY DVVCPPVSAW RLHEAWPEAS
FQMIEDAGHA AFEPGIASAL IAATNQFKRD GTL
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