Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0085 |
Symbol | |
ID | 3960086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 85846 |
End bp | 86664 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637914923 |
Product | nucleotidyl transferase |
Protein accession | YP_521377 |
Protein GI | 89898906 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.420165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGG CGGCCGGCCG CGGCGAGCGT ATGCGGCCCC TGACCGATAC CACGCCGAAA CCTTTGCTGC CCGTGCGCGG CAAGCCGCTG ATGCAGTGGC AGCTGGAGGC GCTGGCGCGC GCGGGTGTGG GCCGGGTGGT GGTCAACACG GCTTGGCTGG GGCCGCAGAT TGCCGCTCAA TTTAATGATG TTTTCAGGCT CCAGCCCGCG TCAAATAAGC ATGAGCAGCT ATCAATTCAG GATAGTCTGC AGATTCGATA TTCCCATGAG GGCCAGGATT TTGGCGCCGC ACTGGAAACC GCCGGGGGCA TTGCCCGCGC CTTGCCGTTG CTGTGCCCGC CCACCGGCGC CGGGGCCCGC GCTGAGGTGT TCTGGGTGCT CGCCGGTGAC GTGTATGTGC CTGACTTTGT CTTCAGTCCG GCGGCGGTGG CGCGCTTTTT AGCTGGTGAC AAGCTGGCGC ACCTGTGGCT GGTGCCCAAC CCGGCGCACA ACCTGCGCGG CGACTTTGGA CTGGGCACCG TTGACACGGG TGGGCCAACG CCGGTCGGCC TGGCGCTTAA TCTGCCCGCC GCTGATCCAC GCCCGCGTTA CACCTATTCC ACCATCGGAC TCTATCGCCG CGCCTTGTTT GAATCACCCT GGTGTGACAT CGCCGCCGGC AATCCGCTGG GCATCAAAGC CCCTTTGGCG CCGCTGTTGC GCGCGGCCAT GGACAATGGA TTCGTGTCTG CCGAACTGTA CGGCGGCCGC TGGACCGACG TTGGCACACC CGAGCGCCTG CGCGCCTTGA ATTTGAACCC GCCCTCTGCC CAACCTTGA
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Protein sequence | MLLAAGRGER MRPLTDTTPK PLLPVRGKPL MQWQLEALAR AGVGRVVVNT AWLGPQIAAQ FNDVFRLQPA SNKHEQLSIQ DSLQIRYSHE GQDFGAALET AGGIARALPL LCPPTGAGAR AEVFWVLAGD VYVPDFVFSP AAVARFLAGD KLAHLWLVPN PAHNLRGDFG LGTVDTGGPT PVGLALNLPA ADPRPRYTYS TIGLYRRALF ESPWCDIAAG NPLGIKAPLA PLLRAAMDNG FVSAELYGGR WTDVGTPERL RALNLNPPSA QP
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