| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0032 |
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| Symbol | |
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| ID | 3960461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 36476 |
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| End bp | 38110 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637914871 |
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| Product | N-6 DNA methylase |
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| Protein accession | YP_521325 |
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| Protein GI | 89898854 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.885751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG AAGAACAACA ATATCTCAAC AACCTTGACA AGCAACTCTG GGCCGCCGCC
GACCGCCTGC GTGCCGCCGT CAACCCCAGC GAATACATGC ACGTCGTCTT GGGGTTGGTG
TTCCTCAAGT ACATCTCCGA CGCCTTCAAG GAACGCCGCC TTGAGCTGCA AGCCGCCTTC
CAAGACCCCG CCAACGACTA TTACCTGGGC ACTGATGCGG ATGAGCTAAT TGCGCAAGAG
CTGGAAGCGC GCGATTACTA CACCGAGACC AACGTCTTCT GGGTGCCCGC CCTGGCCCGC
TGGGACTTTC TCAAAGACAA CGCCAAGGTC GCCATCGACA CCGTGCTCAC CGTCAAAAAC
GGCAAAACCT TTGAATACAA GTTCAAAGGC ATCGGCCGCC TGCTGGACGA CGCGTTGGAG
GCGGTGGAAA AGGACAACCC CAAGCTCAAA GGCGTGCTCG ACAAAAGCTA TGCCCGCTGG
CGCGTGGACG AAGCCTTGCC CGGCCTGATT GACGAGTTTT CCAAAATCCC GTTCAACCAC
GGCGCGCTCA AGGCCAAGGA CATCTTGGGC CACATCTACG AATACTTTTT GGGTGAGTTC
TCCATTGCCG CAGGCAAACG CGGCGGCGAG TTCTACACCC CCAAAAGCAT CGTCAGCGTC
ATTGTGGAAA TGCTGGAGCC GTTTGAAGGT CGCGTCTACG ATCCGTGCTG TGGCTCGGGC
GGCTTCTTTG TGCAAAGCGA GCGTTTTGTG CTGGAGCACG GAGGCAAGAT CGGCCAGCTC
AGCATCTACG GCCAAGAGTT CAACCCCACC ACCTGGCGCC TGGCCAGCAT GAACATGGCC
ATTCGCGGGC TGGACTTTGA CTTTGGCAAA GAGCCCGCCA GCACCTACAC CCGCCCCCAG
CACCCCGATC TGCGCGCCGA CTTCATCATG GCCAACCCGC CCTTCAACAT GAAGGCCTGG
AAAGAAGGCG TGAAAGACGA CGATCCGCGC TGGAAGTATG GCGTGCCGCC CGACGGCAAC
GCCAACTTTG CGTGGATGCA GCACATGATC CACCACCTGG CCCCCCACGG CAGCATGGCC
CTGCTGCTGG CCAATGGCTC CATGAGCAGT AACACCAATA ACGAGGGCGA GATTCGCAAA
GCCTTAATCG AGGCTGACCT CGTGGAATGC ATGGTGGCGC TGCCCGGACA GCTATTCACC
AACACGCAAA TCCCCGCCTG CATCTGGTTC CTTACGCGTA GCAAGGCCGA GCGCAAAGCC
AAACGCAGCC GCCATGGCGA AGTGCTGTTC ATCGATGCCC GCCAACTGGG CTACATGAAA
GACCGCGTGC TGCGCGACTT CAAACCCGAA GACTTGGCCA AAGTCGCCGA CACCTTCCAC
GCCTGGCAGC GCGGCGTGGG CTATGCCGAC GAAGCAGGGT TTTGCAAGGC CGCCACACTG
GCGGACATCG GCAAGGCGGA CTACGTGCTC ACACCCGGCC GTTATGTGGG TGCCGCCGCA
CAAGAAGCGG ACGCCGAACC CTTTGAGGAC AAGATGGCCC GCTTGACCGC TGCCTTAGGC
GACCAGTTTA AGGAAAGCGC TCGCCTGGAG GCAGCCATTC GAAAAAACCT GGCGGGGCTG
GGTTATGAAG TTTGA
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| Protein sequence | MNDEEQQYLN NLDKQLWAAA DRLRAAVNPS EYMHVVLGLV FLKYISDAFK ERRLELQAAF
QDPANDYYLG TDADELIAQE LEARDYYTET NVFWVPALAR WDFLKDNAKV AIDTVLTVKN
GKTFEYKFKG IGRLLDDALE AVEKDNPKLK GVLDKSYARW RVDEALPGLI DEFSKIPFNH
GALKAKDILG HIYEYFLGEF SIAAGKRGGE FYTPKSIVSV IVEMLEPFEG RVYDPCCGSG
GFFVQSERFV LEHGGKIGQL SIYGQEFNPT TWRLASMNMA IRGLDFDFGK EPASTYTRPQ
HPDLRADFIM ANPPFNMKAW KEGVKDDDPR WKYGVPPDGN ANFAWMQHMI HHLAPHGSMA
LLLANGSMSS NTNNEGEIRK ALIEADLVEC MVALPGQLFT NTQIPACIWF LTRSKAERKA
KRSRHGEVLF IDARQLGYMK DRVLRDFKPE DLAKVADTFH AWQRGVGYAD EAGFCKAATL
ADIGKADYVL TPGRYVGAAA QEADAEPFED KMARLTAALG DQFKESARLE AAIRKNLAGL
GYEV
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