Gene Rfer_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0027 
Symbol 
ID3960456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp29130 
End bp29516 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content61% 
IMG OID637914866 
Producthypothetical protein 
Protein accessionYP_521320 
Protein GI89898849 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.784882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCC TTCCCCCTTC CCCTAACCCC TGGCCAAGAC TTGCCCCCTC TGCCCTGGAG 
GCCGTCATCC ATAGCCAAAA CTGCCATGCA GCCTTTGTGC TCTCCGGCAT CGGCAGCCTA
TCTACCGCAG GCCTTCGCTT TGCCGGGGCG GATCAGCCAG AGCGCCTGAC GGGCGATATT
CAGATCCTCA GCCTGTCTGG CACTGTAGCG TTTGATGGCG TCAAGAGCAG TTCGCATTTG
CACATGGCGC TGTCCACGTC CACCGGCCAG GTGCCGGGCG GGTACATACC GGCGGGCTGC
ATCGTGCGCA CCACTGCGGA AGTGCTGGTG TTGTTGCTAG AGTGGGCATT TTCCCGCGAG
CCAGACGCGC TGACGGGGTT TGAATAG
 
Protein sequence
MKSLPPSPNP WPRLAPSALE AVIHSQNCHA AFVLSGIGSL STAGLRFAGA DQPERLTGDI 
QILSLSGTVA FDGVKSSSHL HMALSTSTGQ VPGGYIPAGC IVRTTAEVLV LLLEWAFSRE
PDALTGFE