| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0024 |
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| Symbol | |
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| ID | 3960453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 25444 |
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| End bp | 27717 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637914863 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_521317 |
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| Protein GI | 89898846 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTG CTGCAGCCCC CGCGATCTCC CCTGGTTCAT TGGACATAGG CATTGGTGGC
ATGACCTGCG CCTCCTGCGT GGGCCGGGTC GAGCGCGCCC TGAAAAAAGT GCCGGGCGTG
CAAAGTGTGG CGGTTAATCT GGCCACCGAG TCGGCCCGTA TTGCCTACGC GCCGACCGAG
CAAATGGAGG CGCGCCTGCG CCGGGCGGTG CGCGATGCGG GTTACGAGCC GCTGGCCGCA
GACGCCACCA TCGACGCGCC CGATGCCTCG CCCTGGGCGG GTTTCATGCC GGTGGCGATT
GGCCTGGCGC TGTCGGCGCC GCTGGTGCTG CCGATGCTGG GCAACCTGGC GGGCTGGCAC
TGGATGCTGC CGGCCTGGCT GCAGTTTGCG CTGGCCACAC CGGTGCAATT CATTCTCGGC
GCGCGCTTTT ACAAGGCCGG CTGGCACGCG CTGAAAAATC TGGCTGGCAA TATGGACTTG
CTGGTGGCCC TGGGCACCAC GGCAGGCTGG CTGCTGTCGA TGTGGCTGTG GCTGAACGCC
GCGCCGGGTG TCATGGCGCA CCTGTATTTT GAAGGCTCGG CCGTGGTGAT CACCATGGTG
CTGCTGGGCA AATGGTTAGA GGCCCGCGCC AAGCGGCAAA CCACCTCGGC GATTCGGGCG
CTGCATGGCC TGCGCCCGGC CACCGCGCAT TTGATCAGCA TTGATGGTGA GGTCGATGTG
CCGGTGGCCG AGGTGCTGGT GGGCGACCGG CTGGTGGTCA AACCCGGCGA GCGTTTGCCG
GTGGACGGCC TGCTGCAGGA GGGTCAAACC CAGGTTGATG AATCGATGCT GACCGGCGAG
CCGCTGCCCA TCGTCAAAGA CCCCGGCGCG GCGCTCACCG GCGGCTCCAT CAACGGTGAC
GGCCGCATCG TGATGCAGGT CAAGGCGGTC GGCAGCGAGA CGGTGCTGGC CCACATCATC
CGCCTAGTCG AAGACGCGCA GGCGGCCAAA GCGCCGATTC AGCGCCTGGT CGATCAGGTC
AGTGCGGTGT TTGTGCCGGT GGTGCTGGGT ATTGCCCTGA TCACCCTGCT GGGCTGGTGG
CTGAGCGGCC ACCCGTTTGA AGTGGCCGTG ATCAACGCCG TGACGGTGCT GGTGATTGCC
TGCCCCTGCG CGCTCGGGCT GGCCACGCCG GCCGCGATCA TGGCCGGTAC CGGTGTCGCG
GCCAAGTACG GCATTTTGAT CAAGGACGCG CAGGCGCTGG AGCTGGCGCA CAAGGTGGAC
GTGGTGGTGT TTGACAAGAC CGGCACCCTG ACCGTGGGCC AGCCGCGTTT GACGGCATTT
CAAGCCGTGG CGGGTGGCGA TGAGGTGACG CTGCTGGCCG CCGCGGCCAG CTTGCAAAGC
GGCAGCGAAC ACCCGCTGGC ACGCGCCGTG GTGGCGGTGG CCAGCGAACG CGGCCTGGCC
ATCCATCCGC CCATAACTGT GCGGGCCGTG CCGGGGCGCG GCACCGAGGG CGAACTGCGC
GCCACCGATG GCAACGAGGC AGCGCAACCG AGCTACCTGA TCGGCAGCCT GCGCTGGATG
GACGAGCTGG GGGTGGACTG GCGCGCGCTG GCAGCGCCCG CCGCCACGCT GCAGGGCAGC
GGCGCCACCG TGTCGCTGCT GGCGCGGCGC TGGGTGGCCA CAGCCGCGCA AGCCGAACGC
ATTGAGATCC TGGCGCTGCT GGCGTTTGCC GATGAACCCA AACCCGGCGC CCAGGCCGCC
GTGGCCGCTT TGCGCGCGCG CTCGATCAAG ACCGTGATGA TTTCCGGCGA CAACCAGGGC
GCCGCTAGAG CCATGGCGCG GCGTCTGGGC TTTCGCCCTG AGAGTGACGA AGTGCGCGCC
GAGGTGCTGC CCGGCGACAA GGCCGCGCAG GTGCTGGCGC TCAAGAACGG GGGCCATACC
GTAGCCATGG TCGGTGACGG CGTCAACGAC GCGCCCGCCT TGACCGCCGC CGACGTCGGC
ATGGCGATGG CCAACGCGGG CGGCGGCGGC TCGGATGTGG CGATGCATGC CGCGGGCATC
ACGCTGATGC GCGGCGACCC AGGCTTGGTG GCGGCCGCGC TGGACATCTC CGACCGCACC
GTGGCCAAAA TCCGGCAAAA CCTGTTCTGG GCCTTTGCCT ACAACGTGGC CGGCATTCCG
CTGGCGGCGC TGGGCTTTTT GAATCCGGTC GTGGCCGGGG CGGCGATGGC GATGAGCTCG
GTCAGTGTGA TGAGCAATGC GCTGTTGCTG AAGCGCTGGA AGCCGAGGAA ATAA
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| Protein sequence | MNTAAAPAIS PGSLDIGIGG MTCASCVGRV ERALKKVPGV QSVAVNLATE SARIAYAPTE
QMEARLRRAV RDAGYEPLAA DATIDAPDAS PWAGFMPVAI GLALSAPLVL PMLGNLAGWH
WMLPAWLQFA LATPVQFILG ARFYKAGWHA LKNLAGNMDL LVALGTTAGW LLSMWLWLNA
APGVMAHLYF EGSAVVITMV LLGKWLEARA KRQTTSAIRA LHGLRPATAH LISIDGEVDV
PVAEVLVGDR LVVKPGERLP VDGLLQEGQT QVDESMLTGE PLPIVKDPGA ALTGGSINGD
GRIVMQVKAV GSETVLAHII RLVEDAQAAK APIQRLVDQV SAVFVPVVLG IALITLLGWW
LSGHPFEVAV INAVTVLVIA CPCALGLATP AAIMAGTGVA AKYGILIKDA QALELAHKVD
VVVFDKTGTL TVGQPRLTAF QAVAGGDEVT LLAAAASLQS GSEHPLARAV VAVASERGLA
IHPPITVRAV PGRGTEGELR ATDGNEAAQP SYLIGSLRWM DELGVDWRAL AAPAATLQGS
GATVSLLARR WVATAAQAER IEILALLAFA DEPKPGAQAA VAALRARSIK TVMISGDNQG
AARAMARRLG FRPESDEVRA EVLPGDKAAQ VLALKNGGHT VAMVGDGVND APALTAADVG
MAMANAGGGG SDVAMHAAGI TLMRGDPGLV AAALDISDRT VAKIRQNLFW AFAYNVAGIP
LAALGFLNPV VAGAAMAMSS VSVMSNALLL KRWKPRK
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