| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0023 |
|---|
| Symbol | |
|---|
| ID | 3960452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 24678 |
|---|
| End bp | 25397 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637914862 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_521316 |
|---|
| Protein GI | 89898845 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCATT TGACCTTCCC ACGGTGGCAA GGTTCAGGAT ATGCTCTTGA CCATTTAAAG
GAGTTCTTCC ATGAAGCAAA CATTTACAGT TACCGGCATG ACCTGCGGCC ACTGCGAAAA
AGCCGTCACC CGCGCCGTGA AACAGGCCGA CCCGCAAGCC GAGGTCAGCA TCGACCGCGC
AGCCAACAAG GTCGACGTGC AGTCAGAACA GCCGCGCGAG TTGCTGGCCC AAGCCATTGC
CGAAGAAGGC TACACCGTCG CCGCATGAAG ATGACCCTGC CGGCGCCGAT GGAGGCCGCC
ACGCTGGAGG GCACGCTTTG GCCGGTCGCC ATTGGCGTCG CGGCGCGTCT GTCCAATGTG
TCGGCCAAGA TGGTGCGGCA CTATGAATCG CTCGGCTTGC TGGCGCCGGT GACGCGTACC
GACAGCGGTT ACCGGCAATA CAACGCGGCC GACGTGCGTA CCCTGCAGTT CATCAAGCGC
GGGCGCGATT TGGGGTTTTC GATGGCCGAA ATTGCCGAAC TGGTGAGCCT GTGGCGTAAT
CGCCAACGCG CCAGCGCCAG CGTCAAGCGC ATTGCCCAGA AGCATGTGAA CGAGCTGGCG
CACCGCATCG AAGCCATGCA GGCCATGCAG CGAACCCTGA CCGCCCTGCT GGACCACTGC
CAGGGTGATG AGCGACCCGA TTGTCCGATA CTGGACGATC TGGCGGGGAC TTGTTGCTAA
|
|---|
| Protein sequence | MDHLTFPRWQ GSGYALDHLK EFFHEANIYS YRHDLRPLRK SRHPRRETGR PASRGQHRPR
SQQGRRAVRT AARVAGPSHC RRRLHRRRMK MTLPAPMEAA TLEGTLWPVA IGVAARLSNV
SAKMVRHYES LGLLAPVTRT DSGYRQYNAA DVRTLQFIKR GRDLGFSMAE IAELVSLWRN
RQRASASVKR IAQKHVNELA HRIEAMQAMQ RTLTALLDHC QGDERPDCPI LDDLAGTCC
|
|---|
| |