Gene Rfer_0019 details

Gene Information

• Locus tag: Rfer_0019
• ID: 3960255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 21742
• End bp: 22434
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637914858
• Product: ThiJ/PfpI
• Protein accession: YP_521312
• Protein GI: 89898841
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGA TTCTCATGGT CTTGACCTCG CACAGCCAAC TCGGCCACAC CGGTGCCAAA 
ACCGGCTTCT GGCTGGAGGA GTTCGCCGCG CCTTATTACG TATTCAAGGA CGCGGGCGCC 
GCCATCACAC TGGCATCTCC GCTGGGTGGC CAGCCGCCGC TCGACCCCAA GAGTGACGAA 
GCGGCCTCGC AAACAGATGC CACGCGCCGC TTCAAGGCAG ACCCCGCCGC CCAGGCACTG 
CTGGCCAGCA CGCATCCGCT GCGCGAGTTG TCGGCGGCTG ATTTCGACGC CGTGTTTTAC 
CCCGGCGGTC ATGGTCCACT GTGGGATCTG GCCGAAAACT ACTACTCCAT CGCGCTCATC 
GAAGCCACGC TGGCGGCCGG CAAACCGGTC GCCGCCGTCT GCCACGCCAG CGCCGCGTTG 
CGACACCCCA AGGCGGCTGA CGGCCTGCCG GTGGTGCACG GCAAGTCCGT GACGGGCTTT 
ACCAACACCG AGGAAGCGGC TGTCGGGCTG ACCCAGGTGG TGCCGTTTCT GGTGGAAGAC 
ATGCTCAAGG CAAACGGGGG CCGCTATTCG AAAGGGGCCG ACTGGCAAGC CTTCGTCGTC 
ACCGACGGCC TGCTGATCAC CGGGCAAAAC CCGGCATCGT CCGAACCCGC TGCCAAGGCA 
TTGCTGGAAA AGCTCAGTCA AGTTTCCAGT TAA 

 

Protein sequence

MKKILMVLTS HSQLGHTGAK TGFWLEEFAA PYYVFKDAGA AITLASPLGG QPPLDPKSDE 
AASQTDATRR FKADPAAQAL LASTHPLREL SAADFDAVFY PGGHGPLWDL AENYYSIALI 
EATLAAGKPV AAVCHASAAL RHPKAADGLP VVHGKSVTGF TNTEEAAVGL TQVVPFLVED 
MLKANGGRYS KGADWQAFVV TDGLLITGQN PASSEPAAKA LLEKLSQVSS