Gene Rfer_0016 details

Gene Information

• Locus tag: Rfer_0016
• ID: 3960252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 18731
• End bp: 19351
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637914855
• Product: TetR family transcriptional regulator
• Protein accession: YP_521309
• Protein GI: 89898838
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.951687
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTATTG ATCAATCCGG CGCCAAACAC CACATCCTCG ATTGCGGCGA GCGCCTGGTC 
GCGAGCAAAG GGTTTGTCGG CGTCGGGCTG GCCGAGATCC TGAGCGTCGC CGGCGTGCCC 
AAAGGTTCTT TCTATCATTA TTTCGGTTCG AAAGAACGCT TTGGCGAAGA GTTGCTGGTT 
CGCTACCTGG GCCAGTACCT GAGCCGCCTT GACACCTTGC TCCAGGCAGA TGGAACACCG 
GCGCGGGCGC GTTTGATGCG TTATTGGTCT TACTGGAACA TCACGCAATG CGGCACTGCA 
GCGGACGGCT GCAGCGAGCC CCAAGCGGGC GCCAAGTGCC TGATTGTCAA GCTCAGCGCC 
GAGGTGGCCG ACATCTCGGA GACCATGCGC CTGACCTTGC GCGACGGCAC CGACCGGGTC 
GTGCAGCGCA TTGCCCAGTG CCTGGAAGAG GCCCGCTTTG ATGGCTCCGT GCCGCCCACC 
CTGGTGGCCG ACGCGACCGC CCTGACGTTA TACGAGCTTT GGCTCGGTGC CAGCCTGCTG 
GCCAAGCTGC GCCGCGATGG CAGCCCGTTT GAGCACGCCC TGCGCAGCAC CGAATTGCTG 
CTCGGTTCAC CCCGCATTTG A 

 

Protein sequence

MLIDQSGAKH HILDCGERLV ASKGFVGVGL AEILSVAGVP KGSFYHYFGS KERFGEELLV 
RYLGQYLSRL DTLLQADGTP ARARLMRYWS YWNITQCGTA ADGCSEPQAG AKCLIVKLSA 
EVADISETMR LTLRDGTDRV VQRIAQCLEE ARFDGSVPPT LVADATALTL YELWLGASLL 
AKLRRDGSPF EHALRSTELL LGSPRI