| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0014 |
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| Symbol | |
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| ID | 3960250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 15516 |
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| End bp | 16868 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637914853 |
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| Product | fumarate lyase |
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| Protein accession | YP_521307 |
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| Protein GI | 89898836 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000353189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCCA CTGTTTTTGA CTCAATCCTG TTTCGCGACG CCTTCGGCAC ACCGGCCATG
CGGGCCGTGT TCGACGACAA CGAATTGATC CGTAAATATG TACAGGTCGA GATTGCGCTC
GCCAAGGCTG AGGCTCGCTG CGGCGTCATC CCGGTGGCGG CGGCAGAGGA GATCGCCGCC
TGCTGCAACG GCGACACCCT CGACTTTGAC CTGTTGCGCC ACGAGACCGA GATCGTGGGC
TACCCGATCC TGCCGCTAGT GCATCAAATC TCGAAGCAAG CCGGTGAGTC CGGTGGCTAC
GTGCATTGGG GCGCCACGAC CCAGGACATC ATGGACACTG CCGTGGTGCT GCAACTGCGT
GACGCGTTCG ATTTGGTCGA GGCCGACATT AAAACCTTGC GTCACACGCT GGCAGGTCTG
GCCAAGCGTT ACCGCGATAC GCCGATGGCG GGCCGGACCC ACTTGCAGCA GGCCTTGCCG
ATAACCTTTG GCTACAAGGT GGCAATCTGG CTCGACATGT TTGATCGCCA CGCTGAGCGT
GTCGCGCAGG CTCGCCCGCG GATCATGGTT GGTGAATTCG CAGGTGCTGC AGGTACGCTG
GCCTCGCTGG GCGACAAGGG TTTGGCGGTA CAGAAAGCCA TGATGGAGGA ACTTGGTTTG
GGTGTGCCAG TGTCCACCTG GCACGTTGCC CGTGACGGGT TTGCCGAGGC TGTGAACCTG
CTGGGATTGA TCACCGGCTC GCTGGGCAAG ATCGCTTATG ACGTGATGAT CATGGCATCC
AACGAATTTG GCGAACTCTA TGAGCCCTTC GTCAAGGGTC GGGGTGCCAG CAGCACCATG
CCACAAAAGC GCAACCCGAT TTCCAGCGAG CTGATGTTGG CCTGCGCCAA AGGCGTGCGT
CAGAACGCCG GGCTGATGCT TGACGCGATG GTCCAGGATC TGGAACGTGC AACCGGCCCG
TGGCATGCCG AGTGGATTGC GATCCCGGAA GCCTTTATCC TCGCCGCTGG TGCACTCAAC
CAGGCGAAGT TCATGCTGGG TGGCTTGATC GTTGACGAAA AAGCGATGTT GAAAAACCTT
GGCATGACCA ACGGCTTGAT CGTCGCGGAG GCCGTGATGA TGGGTCTGGC ACCGCACATC
GGGCGCCAGG ACGCGCACGA CGTCGTATAT GACGCCTGCC GCGTCGTCAA TGAGCAAGGC
GGCCGCCTCG CCGACGCGCT CAACGCGATA CCCAGCGTCG CCAGCCGCCT CCAACCAGAG
CTGATCGAGC GTCTGACCGA TCCGGCGAAC TACCTCGGAA GCGCCTCGCA AATGGTTGAC
CAGGTATTGG CAAGTTCGGC CAGGTTGGGC TGA
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| Protein sequence | MASTVFDSIL FRDAFGTPAM RAVFDDNELI RKYVQVEIAL AKAEARCGVI PVAAAEEIAA
CCNGDTLDFD LLRHETEIVG YPILPLVHQI SKQAGESGGY VHWGATTQDI MDTAVVLQLR
DAFDLVEADI KTLRHTLAGL AKRYRDTPMA GRTHLQQALP ITFGYKVAIW LDMFDRHAER
VAQARPRIMV GEFAGAAGTL ASLGDKGLAV QKAMMEELGL GVPVSTWHVA RDGFAEAVNL
LGLITGSLGK IAYDVMIMAS NEFGELYEPF VKGRGASSTM PQKRNPISSE LMLACAKGVR
QNAGLMLDAM VQDLERATGP WHAEWIAIPE AFILAAGALN QAKFMLGGLI VDEKAMLKNL
GMTNGLIVAE AVMMGLAPHI GRQDAHDVVY DACRVVNEQG GRLADALNAI PSVASRLQPE
LIERLTDPAN YLGSASQMVD QVLASSARLG
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