Gene Rfer_0006 details

Gene Information

• Locus tag: Rfer_0006
• ID: 3960242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 7888
• End bp: 8466
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637914845
• Product: NnrU
• Protein accession: YP_521299
• Protein GI: 89898828
• COG category: [S] Function unknown
• COG ID: [COG4094] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.23902
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTATC TCATTCTCGG ACTCATTGTT TTCCTGGGTG TGCACTCGGT GCGTATCGTG 
GCCGATGACT GGCGCACCCA AACCAGAGCG CGCATCGGCC CGCTGGCCTG GAAGGGCTTG 
TACTCGGTTC TCTCCCTGCT TGGTTTCGCG CTGATCGTAT GGGGCTTTGG CCTGGCGCGC 
CAGCAGCCGG TGCAGTTGTG GAGTCCACCG GTAGCGCTGC GGCACCTGGC CTCACTTTTG 
ACCCTGCTTT CGTTCGTGCT GCTGGCGGCG GCCTACGTGC CAGGCAACAT CATCAAGGAA 
CGCATTCACC ATCCCATGGT GCTCGGTGTC AAGCTGTGGG CGCTGGCGCA TTTGCTGGCC 
AATGGCAACC TCGGCCATGT GGTGTTGTTT GGCTCATTCC TGGCCTGGGC AATCGTCGAT 
TTCACCGCGT CACGGCGGCG CGACCGCACA CTCGGCACGC GCTACCCCGG CGGCACCGCG 
GGTGCCACCG GCATCACGGT GGCACTGGGC GTGGGCGCAT GGATTGCGTT TGCGCTCTGG 
CTGCATGGCC TGCTGATCGG TGTGCGACCA CTGGGCTGA 

 

Protein sequence

MTYLILGLIV FLGVHSVRIV ADDWRTQTRA RIGPLAWKGL YSVLSLLGFA LIVWGFGLAR 
QQPVQLWSPP VALRHLASLL TLLSFVLLAA AYVPGNIIKE RIHHPMVLGV KLWALAHLLA 
NGNLGHVVLF GSFLAWAIVD FTASRRRDRT LGTRYPGGTA GATGITVALG VGAWIAFALW 
LHGLLIGVRP LG