Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0004 |
Symbol | |
ID | 3960240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 5397 |
End bp | 5825 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637914843 |
Product | signal-transduction protein |
Protein accession | YP_521297 |
Protein GI | 89898826 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCG TTTTGGAATT GTTAAAAAAT CGTAATTCAA CGGTTTTTCA GGTGAGTCCT TCAGTCACTG TCTTTGAGGC GCTCAAGCTA TTGGCCAACT ATGGGGTGGG CGCCCTGACG GTCATGGAGA ATGGCAAACT GGCGGGGATT GTGTCCGAAC GCGACTACAC CCGTAAAGTT GCGTTGATGG GAAAAAACTC CAAAGAAACC ACGGTGGCCG ACATCATGAC CCGTGATGTC ATTACGGTCA CACCCAACAC CGGGACCCAT GCCTGCATGG CGTTGATGAG CCAGAAGAAA ATCCGCCACT TGCCCGTGCT GGATGGCGCT GAGGTCGTTG GCCTGATCTC GATCCGTGAC CTGATGGACG ACATCATCGC CGATCAGGAA CAAACCATTT CTCAGTTAAC GAGCTACATC AACAGTTAG
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Protein sequence | MKPVLELLKN RNSTVFQVSP SVTVFEALKL LANYGVGALT VMENGKLAGI VSERDYTRKV ALMGKNSKET TVADIMTRDV ITVTPNTGTH ACMALMSQKK IRHLPVLDGA EVVGLISIRD LMDDIIADQE QTISQLTSYI NS
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