Gene Rfer_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0004 
Symbol 
ID3960240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp5397 
End bp5825 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content52% 
IMG OID637914843 
Productsignal-transduction protein 
Protein accessionYP_521297 
Protein GI89898826 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCG TTTTGGAATT GTTAAAAAAT CGTAATTCAA CGGTTTTTCA GGTGAGTCCT 
TCAGTCACTG TCTTTGAGGC GCTCAAGCTA TTGGCCAACT ATGGGGTGGG CGCCCTGACG
GTCATGGAGA ATGGCAAACT GGCGGGGATT GTGTCCGAAC GCGACTACAC CCGTAAAGTT
GCGTTGATGG GAAAAAACTC CAAAGAAACC ACGGTGGCCG ACATCATGAC CCGTGATGTC
ATTACGGTCA CACCCAACAC CGGGACCCAT GCCTGCATGG CGTTGATGAG CCAGAAGAAA
ATCCGCCACT TGCCCGTGCT GGATGGCGCT GAGGTCGTTG GCCTGATCTC GATCCGTGAC
CTGATGGACG ACATCATCGC CGATCAGGAA CAAACCATTT CTCAGTTAAC GAGCTACATC
AACAGTTAG
 
Protein sequence
MKPVLELLKN RNSTVFQVSP SVTVFEALKL LANYGVGALT VMENGKLAGI VSERDYTRKV 
ALMGKNSKET TVADIMTRDV ITVTPNTGTH ACMALMSQKK IRHLPVLDGA EVVGLISIRD
LMDDIIADQE QTISQLTSYI NS