| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0002 |
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| Symbol | |
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| ID | 3960238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1515 |
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| End bp | 2618 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637914841 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_521295 |
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| Protein GI | 89898824 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000744787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTTC TGAAGGCAAC ACAAGACAAG GTTTTATCGG TTTTGCAATC GGTAGCGGGC
ATCGTTGAAC GTCGGCACAC GCTGCCTATC CTGGCCAATG TGCTGATCCG CAAAACAGGC
ACTTCGCTGC AACTGACCAC CAGCGATCTC GAAATTCAGA TTCGCACCAC GGCAGAGCTC
GATGGTGACA CAGGCGATTT CACCACCGTG GGGGCGCGCA AGTTGATTGA TATTTTGCGC
ACCATGCCCG CGGATCAAAC CGTGTCACTG GAGTCAAGTG CCGCCAAGCT CATCCTCAAG
GGTGGCAAGA GTCGGTTCAC GCTGCAAACC ATGGCCGCCG AGGACTTTCC GCTGGTGCAG
GAAGCGGCCA GCTTCGGCCC GGTGTTCAGT GTGCCGCAAA AAACGTTGAA AGACCTGCTG
AGCCAGGTCT CATTTGCCAT GGCGGTGCAT GACATCCGCT ACTATTTGAA CGGCATTCTG
TTCGTCGCCG AAGGTAGCCA ACTCAGTCTG GTGGCCACCG ACGGTCACCG CCTGGCCTTC
GCTTCGGCCA CGCTGGATGT GGAAGTGCCC AAGCAGGAAG TGATTCTGCC GCGCAAAACC
GTCATTGAAC TGCAGCGTTT GCTCTCTGAC ACCCAGGGCG CCATTGAGAT GCAGTTTGCC
AACAACCAAG CCAAGTTCAG CTTCGATGGC ATGGAGTTTG TTACCAAGCT GGTCGAAGGT
AAGTTCCCGG ACTACAACCG GGTTATTCCC AAAAACCACC AGAACAGCAT CACACTGGGC
CGCAGCGCTT TGCTGGCAAC ATTGCAGCGC ACCGCCATCC TGACCAGTGA AAAATTCAAA
GGGGTGCGCC TGAACATTGA CCCCGGCACG CTGCGGGTGG CGTCCAACAA CGCCGAGCAG
GAAGAGGCGG TAGATGAGCT CGATATTGAT TATGGCGGCG ACAGCATCGA GATCGGTTTC
AATGTGACCT ATCTGATTGA TGCGCTGGCC AATATGAGCC AGGACATGGT GCGGCTGGAA
CTGTCTGACG GAAACAGTTC AGCCTTGTTC ACCATTCCCG ACAACGCCAC CTTCAAATAC
GTGGTGATGC CGATGCGAAT TTGA
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| Protein sequence | MIVLKATQDK VLSVLQSVAG IVERRHTLPI LANVLIRKTG TSLQLTTSDL EIQIRTTAEL
DGDTGDFTTV GARKLIDILR TMPADQTVSL ESSAAKLILK GGKSRFTLQT MAAEDFPLVQ
EAASFGPVFS VPQKTLKDLL SQVSFAMAVH DIRYYLNGIL FVAEGSQLSL VATDGHRLAF
ASATLDVEVP KQEVILPRKT VIELQRLLSD TQGAIEMQFA NNQAKFSFDG MEFVTKLVEG
KFPDYNRVIP KNHQNSITLG RSALLATLQR TAILTSEKFK GVRLNIDPGT LRVASNNAEQ
EEAVDELDID YGGDSIEIGF NVTYLIDALA NMSQDMVRLE LSDGNSSALF TIPDNATFKY
VVMPMRI
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