Gene Rfer_4451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4451 
Symbol 
ID3959950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007901 
Strand- 
Start bp208382 
End bp209071 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID637909659 
Productphage integrase 
Protein accessionYP_516135 
Protein GI89885937 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAC AGAAGAGAGC ACTCCGTCTT GATGGTGGGC AGTTCACCAG GCTAATCAAA 
ATTACCAGAG CTACGTCGCG TTACGCCGAC CGCGATGTGC TAGTGCTCAT GCTTGGACAT 
CACACCGGCA TGCGCGTGAC AGAAATCTCT CGAATCACCG TGGCAGATGT GCTGCACCCT 
TCCGGCAAGC TGCGTCAAGA AGTAAGCCTG CGCGAAGCCG TCACCAAGGG TTGCCGCCAG 
CGCTGCGCAT ACCTATCCAG TCGAGCACTG ATTGAAGCCC TGGAGGCCTA TTTGGCGTAC 
CGGCAGGCCC ATGGGATCGG CACTGAATTG GGCGACACGC GGTATCGCGG TCTACTGCCC 
CACCAGCCGC TGATTTTCGG TGGACGGGGT GCCGCCCTAA GCCAGAACAC CAAACGGCGT 
ACCCTGGAGA ATGGGGAGCG CCGGGACTAC AAGGCGTGCG ACTCGCTCCA GAGTCACATC 
ACCAGGCTGT ACAAGCGTGC AGGCATCAAG GGCTCAAGCC ATTCTGGGCG ACGTGGCTTT 
GCGGGTAAGG TGTTGGCCAG CACTGGCGAT ATGGAGACAG TTCGTGTGCT TCTGGGTCAT 
CAGTCCCTGG ACTGCTCGCA AAGGTACGTC GATGTGAGCC CGGCCATCCT CCAAGAAATG 
TTTGCCAGCG CAATTGCGGA TAATTTGTAG
 
Protein sequence
MQKQKRALRL DGGQFTRLIK ITRATSRYAD RDVLVLMLGH HTGMRVTEIS RITVADVLHP 
SGKLRQEVSL REAVTKGCRQ RCAYLSSRAL IEALEAYLAY RQAHGIGTEL GDTRYRGLLP 
HQPLIFGGRG AALSQNTKRR TLENGERRDY KACDSLQSHI TRLYKRAGIK GSSHSGRRGF 
AGKVLASTGD METVRVLLGH QSLDCSQRYV DVSPAILQEM FASAIADNL