| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4362 |
|---|
| Symbol | |
|---|
| ID | 3959878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007901 |
|---|
| Strand | - |
|---|
| Start bp | 126994 |
|---|
| End bp | 128556 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637909569 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_516046 |
|---|
| Protein GI | 89885848 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC ACCTGGTGCT TATGTGCGAA GTGCCCGACA TCGAGCAGAT CCTGGCCATT
CGCAGTCTCT TTCAGTGCGA GTGGACCTTC AACGAAGACA ACCCGGAGCG CCTGCGCACC
GTCAATGCCG AGGGGGAACC CGGCAAACGT GTGATGTTCG CCGCCGATTC CGACGAACCT
TTGCTCTGGG CCACAACCCG TAGCGACAAA ATTGAAATCA CCGTGAGCCC TGCAGTGAAC
CTTCCCGATG AACTGCACCT TCTCTTGCGA GCCATGGGGC TCAAGGAATG CGGCCGATCT
CCTGAAGGTA TCTCGCTGGA TTCAACGGAT GATGAAGTTC TCTTTGACCG AATTTCGACG
TTGGACGCTG CATGGATACT GCTACGGCGC CTCAAGCAAT TCGAAACCGA TGTCCCATCC
ATTCAGACCT CCGCGATTGC GATATTGGAG TTTGCCCAAA ACTGGAAGCT CAACTGCGCT
CGGGTTAGCG ACCGTCGAGA GACTAAAGCC ATGATGGCCC ACAACGACAT GCTGGAAGAG
CAGGCCAGTC GCTTTGCCGA GTGGAACGTG GCGGGCCTCA ACGGCATCAA GTTGAACTAC
GACCCACGCG GGTCGGCGCT GGCGCTGCTG TTCGAAAACA ACCATCCGAT GGATATTTGC
GCTTTGACAT TCAACTGGCC CGTGGGTCAG GGGCTGAACC CAAACGCCCA GCGTCAGAAG
GCCAAGTCCG GCAAATACGA CATTCGACCG ACTCGGATTG CCAGTGATGT GCAAGGCATT
TTGAATGGGC TGGCAGTGCT CGATTGCAAG GTGAAAATCG CGCAACGGTT GCCCCCGCGT
CTTTACGCCA AGGTCAATGA ACTGCTCACT ACCATAGGTG GCCAGTGGTC GACCGCGCAA
CAGGCCCACG TCTTTGCCGA AGACCCCACC CCCATGCTGG AGACCCTCAC CGCCACCGGT
GAGGTCTATA CGGCCAGGGA CTACGAGTTC TTTGCCACGC AGCCCGCTCT AGCCAGCCAG
GTCATTGCAG AGGCAGGTAT CCTGCCGGGC ATGGTCGTGA TCGAGCCCAA CGCCGGCGAC
GGGGCTTTGG CCATGGCTGC GGCCGAGATC GTGGGCAAGT CCAATGTGAT TTGTTACGAG
CTCATGCCGC AAAACGTCAA GACGCTCACC GCGCTGGGGT TTCACCTCCA GGGCCCTCAG
GACTTCCTGG CGGTCAAACC CGAAGCGGTC GCAGACCGGA TCACCATGAA CCCTCCTTTC
TCTGGCGGCC GCGACATGGC CCATATCAGG CACGCCATGG AGTTTCTCAA ACCCGGCGGC
GTGTTGGTGT CCATCGCGTC GACGCAGTGG CAAACCCATG ACACCAAACC CGCCAAGGCC
TTTCAGGCTT ACCTGATGAC GCTTGGTGCC AAAGTCATTG CCATCCCTGC GGGCGCGTTC
AAAGCCTCCG GTACCGACGT TGCAACCACC TTGCTGGTGC TCAAAAAGCC CCTCAACAGC
AAAAAGGCGC CACCGGTGGC CCAGGCTGTG GATCTCCAAC AGGTTCAAGC CGCACTTTTT
TGA
|
|---|
| Protein sequence | MKQHLVLMCE VPDIEQILAI RSLFQCEWTF NEDNPERLRT VNAEGEPGKR VMFAADSDEP
LLWATTRSDK IEITVSPAVN LPDELHLLLR AMGLKECGRS PEGISLDSTD DEVLFDRIST
LDAAWILLRR LKQFETDVPS IQTSAIAILE FAQNWKLNCA RVSDRRETKA MMAHNDMLEE
QASRFAEWNV AGLNGIKLNY DPRGSALALL FENNHPMDIC ALTFNWPVGQ GLNPNAQRQK
AKSGKYDIRP TRIASDVQGI LNGLAVLDCK VKIAQRLPPR LYAKVNELLT TIGGQWSTAQ
QAHVFAEDPT PMLETLTATG EVYTARDYEF FATQPALASQ VIAEAGILPG MVVIEPNAGD
GALAMAAAEI VGKSNVICYE LMPQNVKTLT ALGFHLQGPQ DFLAVKPEAV ADRITMNPPF
SGGRDMAHIR HAMEFLKPGG VLVSIASTQW QTHDTKPAKA FQAYLMTLGA KVIAIPAGAF
KASGTDVATT LLVLKKPLNS KKAPPVAQAV DLQQVQAALF
|
|---|
| |