Gene Rfer_4307 details

Gene Information

• Locus tag: Rfer_4307
• ID: 3959901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007901
• Strand: +
• Start bp: 71371
• End bp: 73266
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637909514
• Product: hypothetical protein
• Protein accession: YP_515991
• Protein GI: 89885793
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0323] DNA mismatch repair enzyme (predicted ATPase)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTA CTGAAAAAGT GACTGACTCG ACCCTCGTTC GTGCCGGTAT CAACGAAAAA 
AAATTCTTCG AGCGCATGGG CCATCTGTTC GAGTCCAGCT TCAGCGTCCT GGGTGAGCTC 
ATGCAAAATG CTCGCCGCGC CGGCGCGACG CGCATCGACT TCAACATTGA TGCTGAGATG 
AAAAGTCTGT CGATTCAGGA CGACGGCCAC GGCATCACCG ATTTCGCTGC CCTGATTAAT 
TTGTGTGATT CGGCCTGGGC CGAGAATGTG GTGCTCGAAG ACAAGCCGTT TGGCATGGGC 
CTGTTCTCGG TGTTTTATGC CGGGGCGTCG GTCAACTTCC TGTCGAAGGG CAAAAATTTG 
AGCTTGTCCA TTGATGACGT CATCAGCAAG CGCCTTGTGG CGGTCGTGGA GGACAACGCA 
GCTCCAGCCA TGGGAGCAAT GGTCAGAATC AATGAACTGA ACGAAAAGTT CCTCAGGCCC 
GTCGACTCTT ACAAAACAGG CGAGAGGATC GTCAAATTAG CGGCGGTTCA ACACATCGAG 
CAATTGAGCA AGGGATTTCC TGTACCTGTG TTCGTCAACG GCATCGAGTT GGAACGACCC 
CATGCTGAAA ACCAGATGGC GTTTACGCTG ACGGATATTG GTCGAGTCTC CATTGGGGGC 
ATTCACCGCG ACAGCGGCAC GCCGGCCAGT GTCAGATATC AGCCCGTCCA ATATTTGCAG 
GGGCTTCCGC TTGGCTTGCT ATGGAGCACA ACGCCTGATT CCAATCCCAT TGTGCATCTC 
GATTCGGTGC AATTTGTCGC CAAGATGCCC GATCGCAACC AACTCTTTGA CGCGCATGAG 
CAGAACGAGG TCATACGAAA AAGCTTGCGA TCGACAGCCA AGCAGTTTTT GATCGCGCAA 
AAAGCCAGTT TGTCGCCCGA GCAAATGGTG CGTCTTCATT GGGAAGATTG CGCTCTGCTG 
GGACTGCTGT ATTTGTTCAA CGACATTTCA CTCGTACCCA AGAGCCTGTT TGAAACGGTT 
TGCGCCGTGA GGATTTCGTC CGATAGTTAC GGTGTTTATG AAGGCACCCC GCACTCAGGG 
AATGTCGAGC TGGTCAGCCG GCAAGACGTG ATTGACGGTG AGATTGTGCC CTGGATGAAC 
GCGCCCGATT CCGCGGACGA TGGTGCCTGG GCATCGGTTT GTCTCAAGGT GATGCAGGCC 
AATGGCATCA AGTCTTTGAG GGGCACTATT GATGAAGCAC ATTGGCTTCA TGATTTGTTG 
CCTTCGGCGT CCGATCTGGA CTTTACCGTG ACTGCGACCG GTGCTTCGGA AAAAGCTGCA 
ACCTTCTACT CAGGCAACGA CGGCAAATCG GCTGAGATTC GCTTGTGCGA CTCCATCTCG 
GTTCAGGTTA CCTCGGCAAC TGACCCTGCA TTTGCTCGGA ATTATCCGGT GAACAACGAC 
TGGATTCTGG TTCCCGTCAA TCCCGAGGAA CACGGGGACT TCGATGACAG CTTTCAAGCC 
TTTGTCTGCC GCGCTAATAA CGCATCTGAT GAGCCGACCG AGGTTTTGTC GTCCTTCCTG 
GACGAGCATG ATCACTATCG CGAAGATTGG GCTGACGAAG ATAAGGCTCA CTGGAACCAG 
CTGTTGAACA ACCTCAATGG CGCACACCTT GCTGCCACCT TGAAGAGCGC TTTTTCTCAG 
TGTGACGTTC AGTTTGCTGA TAGCCACATG TCGCAGATGG CCCTTTGTAC CTTAGGTCCA 
GTTGAGGGTC GCCCGATTGC CTATCCGAAA CTGAATGTGC GTGCGGTTGA CGATGGCACT 
TTCGAGGCCT TGGCGCACGC TATTGGTGTT GGTGTCACTG CCACCCAGAT CAAGCTGGCG 
TTTGAAGCGG TTTTCACCCC TGGCGCAACC GCCTAA 

 

Protein sequence

MEITEKVTDS TLVRAGINEK KFFERMGHLF ESSFSVLGEL MQNARRAGAT RIDFNIDAEM 
KSLSIQDDGH GITDFAALIN LCDSAWAENV VLEDKPFGMG LFSVFYAGAS VNFLSKGKNL 
SLSIDDVISK RLVAVVEDNA APAMGAMVRI NELNEKFLRP VDSYKTGERI VKLAAVQHIE 
QLSKGFPVPV FVNGIELERP HAENQMAFTL TDIGRVSIGG IHRDSGTPAS VRYQPVQYLQ 
GLPLGLLWST TPDSNPIVHL DSVQFVAKMP DRNQLFDAHE QNEVIRKSLR STAKQFLIAQ 
KASLSPEQMV RLHWEDCALL GLLYLFNDIS LVPKSLFETV CAVRISSDSY GVYEGTPHSG 
NVELVSRQDV IDGEIVPWMN APDSADDGAW ASVCLKVMQA NGIKSLRGTI DEAHWLHDLL 
PSASDLDFTV TATGASEKAA TFYSGNDGKS AEIRLCDSIS VQVTSATDPA FARNYPVNND 
WILVPVNPEE HGDFDDSFQA FVCRANNASD EPTEVLSSFL DEHDHYREDW ADEDKAHWNQ 
LLNNLNGAHL AATLKSAFSQ CDVQFADSHM SQMALCTLGP VEGRPIAYPK LNVRAVDDGT 
FEALAHAIGV GVTATQIKLA FEAVFTPGAT A