| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4266 |
|---|
| Symbol | |
|---|
| ID | 3959841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007901 |
|---|
| Strand | - |
|---|
| Start bp | 21195 |
|---|
| End bp | 23084 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637909474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_515951 |
|---|
| Protein GI | 89885753 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTTG TAGCCACCGA AGTAGAGAAT CTATACCGCC CCGCCCACGA GCTCAATGCC
TCGGCAGTGT GGACGTTTTC CGCCGTTGCT TCGCTTGCCG CATCCGCGCT AACACCAGGC
ATGCCGATCG GGGTGGGCGT GGGACTTTGC GGTGCTTCAC TGGGAATGGC GGCCTATCGA
GCAAACCAGT CGTGGCGGCT TTTCGAGGCC AAGTCCGCTT TGGCTGGTAA CTCCTTTTGG
CTCGCACCAA CAAGCTACGT CGATCAAGAA ATCAAGAATT GCAAGCAGCA GCTGTGGCTG
GGCTTGGGCT TTCGCTGGAC AACAAAACAC ACGCAGCGAG CAACGGAGAT ACAGAAATAC
GAGATGGAAG GACTTTTGCC TCCTGCGTGG GCACTCAAGC TCATGGGTAG GCAGCACGAT
TTCTCAAATG TGAAGGGTGA GCCATGGATT CATGGCCTTG AACCTAACGA AAAGGCGATT
GCCATTCCCT GGGACCACGC AGAGGGCAAC TGGAACTTTT TTGGAACCAC CGGCGCGGGC
AAGACCCGTC TTTACGAGCT GCTGGCCTAC CAAGTGATCA AGAAAGGTGA TGTTCTGATC
GTCTTTGATC CGAAATACGA CAAGGACCTC CGAGAGACTT TGATTCGGAC TTGCAAGGCC
GCCGGCCGTC CCGATGCGTT CTGTGAATTT CACCCGGCGT TTCCCGAGCG CAGCATTCGA
ATCGATCCGA CCAAGAATTT TTCACGCGCG ACCGAGATAC CGTCGCGGAT TGCTGATATT
TTGGGTGGTG CCCCTGGCGA CAACTTCATT GCATTTTGCT GGCGTGTCAT GTACGCCATC
ACTGCTGGGC TGCTCTATGT GGACGAGCGC CCATCGCTAA AAAAACTGCG CTTCTATATA
GAGTCGGGTC CTGAGCCGTT GGTAGAGCTT TGTCTTAAAA AGTTCTTCAA CCAATGGTCG
CCCGGTGGAT GGGAAGACCA AGTCAAGGCG TTTGAGGAAA AAATTGCGGG AAAAAAATTC
AAACCCCGCA TGCAAACCGG CACACCCCGG CAACAGGCCA TGGTCCAGGT CTACCATGAA
GTCGTTCCTG TTGATTCCAA GATTGATGAT GTCAACGGCA TTCTCAGTGT CGCCGAACAC
GCCCGCGATC ACTACGGCAA GATGATTGCC GGGATGATTC CATTGCTCAC GCAATTGACT
GCCTCGCCAC TGGATGAACT CCTGTCGCCC GATTACAACG ACTATGCGGA TACTCGTGAA
ATCGTCGACA TGGAGAAAAT AATTCGTGAC AAACGGGTGC TATATATCGC AACCGACTCG
CTGGCCGACG CGACCGTTGG CAGTGCCATT GCCGCCGTCT TACTGGCTGA CCTTCGCGCG
GTGGCCGGCG CACGCTACAA CTACGGAATC CCCGATTCAA CCAAGATTCA TATCCTGTGT
GACGAGGCCT GCGAGCTGGT CACCCCACCG CTGATTGCCA TCATGAACAA GGGTCGCGGT
GCCGGGATGA TTACTTACCT GGCGACCCAG AATTTCTCGG ACTACATATG GAAATTTGAT
TCCGAGGACG CTGCGCGCAT GGTCATCGGT AACGGCAATA ACCGGTTGTG TTTGCGTGTG
GTGGACACCA AGACGCAGCA ATACATGTCC GAGACGTTTG GTGAAACAAC GATAACTTCG
ACCATGGCGT CGATGGGGTC GAGCACCAGA ACGGAGGAAC CCGGCATGGA ATTTGGGGGA
TCTGTTACCA ATGCAGTCAA AGAGCAGGCA GCAGAGATAT TCCCTGGCTA TTTGCTTGGT
CGCCTGCCCG ACTTGCACTA CGTTGCCTCA ATCAGCGGTG GAAAACTATT TAAAGGCCGC
TTGCCCAAGC TGGTTCACAA GAATGTTTAA
|
|---|
| Protein sequence | MPVVATEVEN LYRPAHELNA SAVWTFSAVA SLAASALTPG MPIGVGVGLC GASLGMAAYR
ANQSWRLFEA KSALAGNSFW LAPTSYVDQE IKNCKQQLWL GLGFRWTTKH TQRATEIQKY
EMEGLLPPAW ALKLMGRQHD FSNVKGEPWI HGLEPNEKAI AIPWDHAEGN WNFFGTTGAG
KTRLYELLAY QVIKKGDVLI VFDPKYDKDL RETLIRTCKA AGRPDAFCEF HPAFPERSIR
IDPTKNFSRA TEIPSRIADI LGGAPGDNFI AFCWRVMYAI TAGLLYVDER PSLKKLRFYI
ESGPEPLVEL CLKKFFNQWS PGGWEDQVKA FEEKIAGKKF KPRMQTGTPR QQAMVQVYHE
VVPVDSKIDD VNGILSVAEH ARDHYGKMIA GMIPLLTQLT ASPLDELLSP DYNDYADTRE
IVDMEKIIRD KRVLYIATDS LADATVGSAI AAVLLADLRA VAGARYNYGI PDSTKIHILC
DEACELVTPP LIAIMNKGRG AGMITYLATQ NFSDYIWKFD SEDAARMVIG NGNNRLCLRV
VDTKTQQYMS ETFGETTITS TMASMGSSTR TEEPGMEFGG SVTNAVKEQA AEIFPGYLLG
RLPDLHYVAS ISGGKLFKGR LPKLVHKNV
|
|---|
| |