| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4263 |
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| Symbol | |
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| ID | 3959838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007901 |
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| Strand | - |
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| Start bp | 18868 |
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| End bp | 19863 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637909471 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_515948 |
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| Protein GI | 89885750 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTG TTCAGATAGA TGCAACCGCA AAAAACGCCG AAAAGGCGTT TGACTTGATT
CGTGCCCGTC TTTCGCCCCT CTTTGAACTT TTCCTTCAGG ATGGCGTCAC GGAGGTGAAC
TTTAACGGCC CCGATGATGC CTGGGTGACG AGAGTTGGTC GAAGGGAGCC GGCCAGTGTC
AATGGAATCA ACGAGGTGAC GGCATCGTCT GCGGTGCGTG AACTGGCTTC GAGCATGGGT
CAGGAATCCA TTGCATCAAC TACGTCTGCC ATCGTCGATG CCAAGATGCC AGGATTTCGG
TTCTCGGCCA TCTTGTCGCC CATCGCATCC AAGGGCACGG CTCTTTCCAT TCGAAAGCAC
AGTCCCCGGG TGCTGTCGCT ACAAGACTAC GTTGACCAGA AAGTCATCAG CCCAGAAATG
GCCCGAATTC TTTCTGAAAA AGTCAAGGCG GGCGCCAACA TGCTCATTGG AGGTGGCACC
GATTCGGGCA AGACGACCTT TCTGAACGCG CTGAGCCGGG AAATCCCGGA GGGTGATCGT
GTGGGAACGA TTGAGGACAC GCGTGAGTTG TCCCTGATCG TCAAAAACTG GTTGCCACTG
GAAACGAACG CACAAAAGGG AGTAACGGCC ACGCTGTGCC TCAAGTCATT GATGCGTCAC
AGTATTGACC GCATCATTTG CGGAGAACTC AGAGATGGCG CTGCTGCGGA CTTCATCTCG
TCGGCCAATA CGGGCCACCA CGGGTGCATG ACCACTCTAC ATTGCAACTC CGCAGGAATG
GCACTTGAGC GACTGGAAGA CCTATGCCTG CAAGGGGATG CCAGTTGGCC GCTTGTTGCG
ATCAGGCGGA ACATCGGACG CACGATCCAA TTCGTCGCTC ACTTCAAGAA AGCCGACGGC
CGGCGCTTTA TCACCGAGTT GATTGAGATC GAAGGAATCG ATCCCAACAC CAACGCCTAC
GTCATCAAAT CAATTTTTAA CCACCAGGAG CATTAA
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| Protein sequence | MATVQIDATA KNAEKAFDLI RARLSPLFEL FLQDGVTEVN FNGPDDAWVT RVGRREPASV
NGINEVTASS AVRELASSMG QESIASTTSA IVDAKMPGFR FSAILSPIAS KGTALSIRKH
SPRVLSLQDY VDQKVISPEM ARILSEKVKA GANMLIGGGT DSGKTTFLNA LSREIPEGDR
VGTIEDTREL SLIVKNWLPL ETNAQKGVTA TLCLKSLMRH SIDRIICGEL RDGAAADFIS
SANTGHHGCM TTLHCNSAGM ALERLEDLCL QGDASWPLVA IRRNIGRTIQ FVAHFKKADG
RRFITELIEI EGIDPNTNAY VIKSIFNHQE H
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