Gene Rfer_4255 details

Gene Information

• Locus tag: Rfer_4255
• ID: 3959830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007901
• Strand: -
• Start bp: 9877
• End bp: 11943
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637909463
• Product: AAA ATPase, central region
• Protein accession: YP_515940
• Protein GI: 89885742
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0464] ATPases of the AAA+ class

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGCCG AAACAAAGAG GTCGATCACA TTGGTTCCAG ACAACAGTTT AGGTTTGACC 
GTAATCGCCA CGGTACTCGC CTTCTGTCTG TATGTGTGGC TCGTCAACTC AGCGATGGCG 
CGGGCTCCGT TCGTTTCATG GGCGTCGAGC AGCAGTGCCG TCACCGCTGT CCAGTGGGGG 
GGGATGATTT ACTTTCTATG TATCTTTGCG GCGCAGATTC CAGAGGCCAC TATTCGTGCC 
GCCACATACC TGTATGTATT CTTTTTTCCG TTTCTCATGG CGGTGGTCGC CGCTGTAACG 
GCGCAAGGCA TTGGCGAATT TGGTCCAGTA ATGCTACCCC TTGCGTTTTT GACGGTGGGA 
ATTATCTTCC CGGTCCTGAT CGGTTGGTTA ATGGCGGTTA CAACAAGAAC AGTCATCAGG 
TTTTTCATCA TCAGTCCTGT AGCATGGTCT GCAGGCATCA AGTCGCCTCA AGCAGATCTT 
CCCAAGGGAC AGAACACAAC GGAAGTACAG CGTCCTCAAC CTGCAGAAAA CAGCACTGCA 
AACACAGAGA CTCAGAGCCA TAGTTTTGCG TGGAAGAACC CGACGGTGGG TTTAGACAGC 
ATGGTGGGGA TGGCTGACTT CAAAGCCGAG TTGCTAAAAA ACATCCAACC TTTCCGCGAT 
TACGCTGCCC GTAAAGGGAC GGTTGCTGAC ACAAATGGCA TTCTGCTTTC TGGCCCATCG 
GGAAACGGAA AGACGACTAT CGCTGAATTA ATTGCGGGGG AGCTCGGTCT ACCCTTTGTG 
AAACTTGGCT GCCAAGATCT CACAAGCAAA TGGGTCAATG AGTCTCCAGC AGTTTTGAAA 
GAGCTTTTCC GCCAAGCTGC CTTAGAGCCC TGCGTTGTTT TCTTTGACGA ATTTGATGGT 
GTCGCCATGA GCCGGGGCAA TGGAAACATG CACGACGAAG ACCGCAAGCT GGTCACAGCA 
TTGCTCTCCG AAATCGACAA CGCACGAAAA TCGCGGATTG TCCTGATTGC CGCAACAAAC 
TTTGCGGAGA AAATTGACTC CGCCATAGCT CGCGACGGGC GTTTTGACTT CCGCATTGAA 
GTTCCCTACC CGGACCAGGA AGCCCGGGAG GCAATTTTGC GCGGGATGCT CAAGAAATTC 
AATGTCACCG CCGAAGAGTC CACCGTGCAT CACGTAGCCG AACTCTGGGT GCGCCGCTCA 
ATCGCCTTTA TCGAATCCAC CGTCAAACGC CTGCGTGACA ATGGCAAAGG GATCAAGAGC 
ACTATCGCCA CGGTCGAGGA CTTCAAACAG GCTTCGCGCG AGGCCTCGCG CCGCGCCAGC 
GCAATCCCCA ATTTTGGTGC TAAGTTGTCG GAAATTGCAT TGACCTCTGA GGTGCGCCGC 
GAAACCGACA GTCTGGTCTA CCGGTTGCGC CACTGGGAAG AAATCACAGA ACGCGGTGGG 
GAGCCACCGA GCGGGGTCTT GCTGTATGGC CCACCGGGCA CCGGCAAGAC CAACCTCGTG 
CGCGCGCTGG CCCGTGAACT CGAATACTGG CACGTGTTCG AGGTCAATGC CTCCGATGTT 
TTACAAGACC CGCGCAAGTT CCGCGACACC ATGGACCTTG CCTCCAATCA TCGCCCGGCC 
ATCATCTTCA TTGACGAGGC CGATGAATTG CTGCGCGATC GCACACATTC AAACGCCGCA 
GGCGCGACCA ATGAAATCCT CAAAGCCATG GACGGCATGA TGGGCAAAAT TCCAGAAATC 
GTGTTTATGG CGGCGACCAA CAATGCCGAG ATCATTGACG GAGCCGCGCT GCGCGGCGGC 
CGCTTTGCAG AGAAGATTTT CATGGGCAAA CTCACGGGTG AGGATCTGGT GACCTTTCTG 
GAGAAAGACT TCGTCTCCAA GACAAAGGTA ACGTTTGCGC CGGACCTGAC TCCCAGAGCC 
CTTGCTGCAA AACTTCGCGA GGCTGCACCA TCGGACGCCC TGGGTCTGTT GCGCAAGGCC 
ATCAATTACA CATTCGGTCA AGGATGTGAT GCCCGGCCGG TTTGCATGGC TGACATCGAC 
AAGGCGATCA TTTCGACGCA GCTGTAG 

 

Protein sequence

MDAETKRSIT LVPDNSLGLT VIATVLAFCL YVWLVNSAMA RAPFVSWASS SSAVTAVQWG 
GMIYFLCIFA AQIPEATIRA ATYLYVFFFP FLMAVVAAVT AQGIGEFGPV MLPLAFLTVG 
IIFPVLIGWL MAVTTRTVIR FFIISPVAWS AGIKSPQADL PKGQNTTEVQ RPQPAENSTA 
NTETQSHSFA WKNPTVGLDS MVGMADFKAE LLKNIQPFRD YAARKGTVAD TNGILLSGPS 
GNGKTTIAEL IAGELGLPFV KLGCQDLTSK WVNESPAVLK ELFRQAALEP CVVFFDEFDG 
VAMSRGNGNM HDEDRKLVTA LLSEIDNARK SRIVLIAATN FAEKIDSAIA RDGRFDFRIE 
VPYPDQEARE AILRGMLKKF NVTAEESTVH HVAELWVRRS IAFIESTVKR LRDNGKGIKS 
TIATVEDFKQ ASREASRRAS AIPNFGAKLS EIALTSEVRR ETDSLVYRLR HWEEITERGG 
EPPSGVLLYG PPGTGKTNLV RALARELEYW HVFEVNASDV LQDPRKFRDT MDLASNHRPA 
IIFIDEADEL LRDRTHSNAA GATNEILKAM DGMMGKIPEI VFMAATNNAE IIDGAALRGG 
RFAEKIFMGK LTGEDLVTFL EKDFVSKTKV TFAPDLTPRA LAAKLREAAP SDALGLLRKA 
INYTFGQGCD ARPVCMADID KAIISTQL