| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4253 |
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| Symbol | |
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| ID | 3959828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007901 |
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| Strand | - |
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| Start bp | 8100 |
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| End bp | 8912 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637909461 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_515938 |
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| Protein GI | 89885740 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGAT TTTTCCTTAA AGCCGTCTTT TCGGTTGTCT TTGTCCTTGC AGCATCCTGG
GCGCACGCTC AGGTGGATGC CGAGCCATTG CCCGGAGATC CACGACTGGT TGTCTTTCAA
TACGATGAAA ACAACAGCTA CCGGGTGTTC ACCAAGCCGC TGGCTACAAC TCACATTCAG
TTCGACAACG ATGAGCGGGT AAAAGTTCTT GCGCTCGGGG ACACAGTTGG CTGGATCACA
GCCCAAAAAG ACAATAACGT CTTTGTCAAG CCGCGTTATC CAAATAGCAG CACGAGCGGC
ACGTTGATCA CAACCAAACG AACCTACCAG TTCGTATTCA AGTCGACAAC AGAGAGCGGG
CGTTGGTATC AGCGGGTGTC CTTTCAGAGC CCGACTGACA TGTTGATAGA GGCATCGGAT
GCTGATCGTC GCCATCTCGC TGCCGCCGTT GCTGAAAGAC CGTCGCCATC AACAGTTGAG
GATCGCAGCA ATCAGTCAGT TTCACCGGAA CTGCTGAACT TCAACTATGA GGTCACCGGT
GACACCCGAA TCAAGCCGCT CAATGTCTTC GATGACGGCA TTGCAACGTA CATTCAAATT
CGTCAGGCTG AAGACGTGCC AGCGGTCTTT CGACTGGTGG ACAAGGATGT CGAACTCGTT
GAGTACGTTC TGAAAGGCAA CACAATCGTC ATACCGAGGG TATTGGAAGC GGGCCTTCTA
AAGCTTGGCA ATCAGGAGGT GCGTTTCTAT AACCTGAAGC GGGGCAGTAA GCGGCTGTTC
GGGGGCTATT CGTTTGAAGG TTCGGAAAAA TGA
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| Protein sequence | MMRFFLKAVF SVVFVLAASW AHAQVDAEPL PGDPRLVVFQ YDENNSYRVF TKPLATTHIQ
FDNDERVKVL ALGDTVGWIT AQKDNNVFVK PRYPNSSTSG TLITTKRTYQ FVFKSTTESG
RWYQRVSFQS PTDMLIEASD ADRRHLAAAV AERPSPSTVE DRSNQSVSPE LLNFNYEVTG
DTRIKPLNVF DDGIATYIQI RQAEDVPAVF RLVDKDVELV EYVLKGNTIV IPRVLEAGLL
KLGNQEVRFY NLKRGSKRLF GGYSFEGSEK
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