Gene Rfer_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4253 
Symbol 
ID3959828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007901 
Strand
Start bp8100 
End bp8912 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content52% 
IMG OID637909461 
Productconjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_515938 
Protein GI89885740 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAT TTTTCCTTAA AGCCGTCTTT TCGGTTGTCT TTGTCCTTGC AGCATCCTGG 
GCGCACGCTC AGGTGGATGC CGAGCCATTG CCCGGAGATC CACGACTGGT TGTCTTTCAA
TACGATGAAA ACAACAGCTA CCGGGTGTTC ACCAAGCCGC TGGCTACAAC TCACATTCAG
TTCGACAACG ATGAGCGGGT AAAAGTTCTT GCGCTCGGGG ACACAGTTGG CTGGATCACA
GCCCAAAAAG ACAATAACGT CTTTGTCAAG CCGCGTTATC CAAATAGCAG CACGAGCGGC
ACGTTGATCA CAACCAAACG AACCTACCAG TTCGTATTCA AGTCGACAAC AGAGAGCGGG
CGTTGGTATC AGCGGGTGTC CTTTCAGAGC CCGACTGACA TGTTGATAGA GGCATCGGAT
GCTGATCGTC GCCATCTCGC TGCCGCCGTT GCTGAAAGAC CGTCGCCATC AACAGTTGAG
GATCGCAGCA ATCAGTCAGT TTCACCGGAA CTGCTGAACT TCAACTATGA GGTCACCGGT
GACACCCGAA TCAAGCCGCT CAATGTCTTC GATGACGGCA TTGCAACGTA CATTCAAATT
CGTCAGGCTG AAGACGTGCC AGCGGTCTTT CGACTGGTGG ACAAGGATGT CGAACTCGTT
GAGTACGTTC TGAAAGGCAA CACAATCGTC ATACCGAGGG TATTGGAAGC GGGCCTTCTA
AAGCTTGGCA ATCAGGAGGT GCGTTTCTAT AACCTGAAGC GGGGCAGTAA GCGGCTGTTC
GGGGGCTATT CGTTTGAAGG TTCGGAAAAA TGA
 
Protein sequence
MMRFFLKAVF SVVFVLAASW AHAQVDAEPL PGDPRLVVFQ YDENNSYRVF TKPLATTHIQ 
FDNDERVKVL ALGDTVGWIT AQKDNNVFVK PRYPNSSTSG TLITTKRTYQ FVFKSTTESG
RWYQRVSFQS PTDMLIEASD ADRRHLAAAV AERPSPSTVE DRSNQSVSPE LLNFNYEVTG
DTRIKPLNVF DDGIATYIQI RQAEDVPAVF RLVDKDVELV EYVLKGNTIV IPRVLEAGLL
KLGNQEVRFY NLKRGSKRLF GGYSFEGSEK