| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4252 |
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| Symbol | |
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| ID | 3960001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007901 |
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| Strand | - |
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| Start bp | 6727 |
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| End bp | 8049 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637909460 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_515937 |
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| Protein GI | 89885739 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGTTC CGCCAAAAGG ACTGATCCCA CGGTCTGGGC TCTTCTTCTT CATTGGAATA
TTCGTTCTGA TGCTGATTGC CTTTGCTGCG TACGACCTGA CAAAATCACG TCCTGCGCCA
CCTATAGCGA AGGACGCCAA CGACAAGGCC GGCACCCCAA TGACGGCGGT AAACGCCAAC
CCACCACCAC CACCGGGTGA CATAGCAGAG ATAGCTCGCG CCCAAGGAGC GAAGGCAGAT
CAAGTCGTCG CTGCTGAAGC CCGCATTTCC GCGAATGCAA GCACACAGCC ACTCCCCGCT
GGCACGGTCA CGGGCAATGG CGCCACTCAA TCACGGCGGG GCATGATTCT TCCCAAAGGC
ATGAGCAACC CTGATGGTAC GGCTGGCGCC ACTTCGATTG AGTCGGCCAG CGATCAGCGT
GAGGCTGCCG CAGCTGTATC GGGCATCTTC TCCATGACGG GCAGTGGAGA AGGGGTTGCT
GGTGCTTTAG GACGCATGGG TGCGCCAGGC GCAAGTGAGA TGGAGACTTC AGCAGATGCT
GTGCAACGCC AAATCGATGC GCTAACAAAG ACCCAGAATG GCACAAATCA GGACGCGGGT
GCCCCCTTCG ATGTTGCAAA GATATTGGCG AGCCTGCAAG GCGGTCAAAA AGCACCAGTC
ACAGGCAAAG ACCAGGCATG GCTCAAGGAG TCGGCCAGCG AGACGGTGTC CGAGGCCGTC
TACGCCAAAA CACCGGCGTC GCCGTGGATG CTGTTTCAAG GTACGCGAGT TCCCATTGTG
CTGCGTGAAG AGGTCAATAG CGATCTCCCC GGCTCTGTGA CGGCCATGTC GACATCGCCG
GTCTATGACA GCATCAATCA GTGCGCAGTG CTTCTTCCTC CTGGAACCAA GTTTTATGGA
GCCTACAGCG CCGATATTCG CCCTGGACAG TCACGCGTAC TGTTCGCATT TCGGCGCATG
ATTTTGCCCG ATGGACGCTC CGTAGTCCTC GATGGAGCAC AGGCCGTCGA CCAGCGCGGC
GCCGTAGGCG CTGAAGGTGA TGTCAACAAC CACTTTCTGC AAATGTACGG GTACGGCTTT
GCGATAGCAC TGCTTTCGAG CGCAGGTGGA AGTGGTGGGG CGAATGTGAC AACTACTGAC
GTCAGCGGAA AATCCACCAC CACAACGATT GCCGGTCAAG TCCTGGCCGA CATTGGCGGC
AAGATCATGA GCCGTAACGC CACTATTCCT CCAACCATCA AACTCGATAT TGGAAGTCGC
ATGTTTTTGA CCATCGTCCG AGACATTGCG CTCGCGCCTA CATCGAGGAA TCATTGCAAA
TGA
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| Protein sequence | MEVPPKGLIP RSGLFFFIGI FVLMLIAFAA YDLTKSRPAP PIAKDANDKA GTPMTAVNAN
PPPPPGDIAE IARAQGAKAD QVVAAEARIS ANASTQPLPA GTVTGNGATQ SRRGMILPKG
MSNPDGTAGA TSIESASDQR EAAAAVSGIF SMTGSGEGVA GALGRMGAPG ASEMETSADA
VQRQIDALTK TQNGTNQDAG APFDVAKILA SLQGGQKAPV TGKDQAWLKE SASETVSEAV
YAKTPASPWM LFQGTRVPIV LREEVNSDLP GSVTAMSTSP VYDSINQCAV LLPPGTKFYG
AYSADIRPGQ SRVLFAFRRM ILPDGRSVVL DGAQAVDQRG AVGAEGDVNN HFLQMYGYGF
AIALLSSAGG SGGANVTTTD VSGKSTTTTI AGQVLADIGG KIMSRNATIP PTIKLDIGSR
MFLTIVRDIA LAPTSRNHCK
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