| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4210 |
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| Symbol | |
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| ID | 3936699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4315345 |
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| End bp | 4316196 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906596 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_512152 |
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| Protein GI | 89056701 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGAAC TTCCAGAGGT AGAGACAGTG CGTCGCGGCC TGGCCCCGGT GTTGGAAGGG
GCGCGGATCG CCCAAGCGGC GGTGAACCGC CCCGATCTGC GCTGGCCGTT TCCGGACAAC
ATGGCGCAGC GGCTGACTGG GGCGACGGTC ACTGCCCTGC GGCGTCGGTC AAAATACATC
CTTGCCGATC TTGATACCGG GGAGACGTTG CTGATCCATC TGGGGATGTC CGGGCGCATG
CAGATCTCGG GCGATGTCAT CGGCAGTTTT CACCACACTC ATCCGGCAGC AGCGAAGCAC
GACCACGTTG TTCTTGATAC CGACGCCGGC GCGCGGATCA CCTTCAACGA CGCACGCCGG
TTCGGCGCGA TGGACCTGAT GGACACCGCC ACGCAGGATC AGCACTGGCT GCTCCGCGAC
CTGGGGCCGG AACCTTTGGG CAATGCGTTT AATGAAGCGC ATCTGGTTGC TGCGTTCAAA
GGCAAGCGGT CACCGGTCAA AACAGCGCTG CTCGATCAAC GCATCGTCTC GGGCCTTGGC
AACATATATG TGTGTGAGGC GCTATGGCGG GCCGGGATCA GTCCCCTGAG ACAAGCGGGA
AAGATCGCGG CGGTCCGAGT CGCCACCCTT GTTCCGATCA TCCGCGATGT CCTAACGGAA
GCTATCGAAG CCGGTGGCTC TTCCTTACGA GATCATCGGC AAGCAACCGG GGAACTGGGA
TATTTTCAAC ACACCTTTAG GGTGTATGGG CGGGAAGGCC AACGGTGCCA AACCCCAGAT
TGCGCTGAAA AAATCCTGCG CAAGGTGCAG TCGGGACGCT CCAGTTTCTA CTGTCCGGCC
TGTCAGAGAT AA
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| Protein sequence | MPELPEVETV RRGLAPVLEG ARIAQAAVNR PDLRWPFPDN MAQRLTGATV TALRRRSKYI
LADLDTGETL LIHLGMSGRM QISGDVIGSF HHTHPAAAKH DHVVLDTDAG ARITFNDARR
FGAMDLMDTA TQDQHWLLRD LGPEPLGNAF NEAHLVAAFK GKRSPVKTAL LDQRIVSGLG
NIYVCEALWR AGISPLRQAG KIAAVRVATL VPIIRDVLTE AIEAGGSSLR DHRQATGELG
YFQHTFRVYG REGQRCQTPD CAEKILRKVQ SGRSSFYCPA CQR
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