| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4206 |
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| Symbol | |
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| ID | 3936695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4310382 |
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| End bp | 4312220 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906592 |
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| Product | flagellar hook-length control protein |
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| Protein accession | YP_512148 |
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| Protein GI | 89056697 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3144] Flagellar hook-length control protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGATC TGTTCCAGAA CCTCGGCACC CCGGGGCGGG GCACACACTC TCGCAACCGG
CCGGGTACGG AGATGAATGT CGCGCAAGGT GCGGCGTTCG GAGCCGCCTT CGAATCTCTG
CCGGCAGACG AGGACGAGTG GACGATCCTC GACAGGCACA GCGGCCTTGC AGCGGACGTG
CACGTCGGTA AGCGATTGGG AACGGCGCAG GGGCAGGATC CCCTTCGAGA TCAACCGCCG
ATCGCACCAA ATGAAGGCGA TGTCACCGAC GCCATGTTCA CGACTCAGCC GGGAATAGTA
AACACGACGC CTCTAATTGG CGGCCAGCCA GAAGACCCGT CGGTTTCAAA CATGGTGATT
GCGGCGCAAC TTACGACTGT TGAAGCGGGC GGTGTCGCGG ACATTTCTGA CCAACGGGCA
AGTGTTGGGC TGGTAATCAC TCCAGGCCAT GCGACCGTCG GCATGGGTCC TTTGGGTCAG
ACCAGCCGGT TGGCGATGCC CGTGATCGAA CGGAACGCAG GTGATCCGTC CGCCCTTCCA
ACTGCCACGC ATAACGAAAC CCGATATACG TCTACACCGT CGGGGCCAGG GGCCGTTCCG
GTGGAGCGCA TTGGCACATT GGCCTCGCCA CCGACGATCA CGTCGGTCGA GGGCAAAACA
GCGCAAACCA CACCGCTGAC TGTCCCGTCG TCCGACGGCG TGACAATTCC CCTATCGCTG
CGGGGGACCG AAAATACGCC GCGCCCCACA TCGGCGCTTG CGGCGCGGAC GGGCTCTCAA
GACCAGATGA GCATTTTGCC GGCGTCGAAC TCCTTCGCGC CACAGCCAAC CGGCAGTAAT
GGTACCAATG CCATCGGAAC CCCCGATCAA CGAGCTGCGC CAGCACTTGC GCCGACCGCT
CGCGACACTC TCCCAAAAAT CGGTGGGGCG GAGCAAGCAT CCACGCAGAC TCCTCTGCTA
ACCGATGCAA AGGGGATGCC GCACTCACCG CTCACCGCAC AAATGCGAGA AGCCAACCCA
CCGAGTGACG CACGCTCGAC AGATGCACTC ACACCGCCGC GCACAACGGT TCCGCAACCA
CCTCAGTCAA GCCCACCCGG TAGCTTGGTT TCCGCAGCGT CCATGTCGGC TAGCGGTGAC
CCGGACCCCG AGTCGATCTT CGATAAGAAC CACGCAGAAT TGCCCCGATC CGGCGACTCT
GCGCCTGCAC GCACGGGCAG CTGGGCCATC ACGCCTGCCA CCGCAGCCGC ACCGGTGATC
TCCGCTCCCA TGCAGTCCAT TCTCAGCCCG ATGTCGGGCC TATCGACGAT GCCTATGCAT
CCAGATATCA GCGCAGACCC TTTGGCAGAC CTCGACTTTT CCGTTCAAAG CTTGTCTGCA
ACCTCCACGA CAGCCGCGCC GCCGTCCGCG TCCATCTTTG CACAAGCCTC CTCCGCCACC
GCCCAAGTGG TCGCGCAGCA AGTTGCTGCG GCGTTGTCGA AAGGCAATCC TGCCTCGGAC
GCCCCGTTGG AACTTGCGCT GGACCCGCCG GAACTTGGGC GGTTGCGCAT GCAAATTACG
GAAATCGCAG GTGTCATGAC CCTCATGATT CAGGCCGAAC GGCCAGAAAC AGCGGATTTG
GTGCGTCGAC ATCTGGAACT TTTGGCGCGG GAATTCGCGC AGGAAGGCCT GGATGCTCCA
TCGGTCCACG TCTCGCAAGA AGGGGCCGGT GACGGTCGAC AGCACTTGCC GGGTGACAGC
GCCGATGCAG CCGCCCCCTC AACCGTTGAT GACCCAACCG ATGCCTCACC GCCCGAAATA
GGCCGCGCTG CACGCAGCGG ACTAGACCTC AGATTATAG
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| Protein sequence | MDDLFQNLGT PGRGTHSRNR PGTEMNVAQG AAFGAAFESL PADEDEWTIL DRHSGLAADV
HVGKRLGTAQ GQDPLRDQPP IAPNEGDVTD AMFTTQPGIV NTTPLIGGQP EDPSVSNMVI
AAQLTTVEAG GVADISDQRA SVGLVITPGH ATVGMGPLGQ TSRLAMPVIE RNAGDPSALP
TATHNETRYT STPSGPGAVP VERIGTLASP PTITSVEGKT AQTTPLTVPS SDGVTIPLSL
RGTENTPRPT SALAARTGSQ DQMSILPASN SFAPQPTGSN GTNAIGTPDQ RAAPALAPTA
RDTLPKIGGA EQASTQTPLL TDAKGMPHSP LTAQMREANP PSDARSTDAL TPPRTTVPQP
PQSSPPGSLV SAASMSASGD PDPESIFDKN HAELPRSGDS APARTGSWAI TPATAAAPVI
SAPMQSILSP MSGLSTMPMH PDISADPLAD LDFSVQSLSA TSTTAAPPSA SIFAQASSAT
AQVVAQQVAA ALSKGNPASD APLELALDPP ELGRLRMQIT EIAGVMTLMI QAERPETADL
VRRHLELLAR EFAQEGLDAP SVHVSQEGAG DGRQHLPGDS ADAAAPSTVD DPTDASPPEI
GRAARSGLDL RL
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