| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4195 |
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| Symbol | |
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| ID | 3936684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4303237 |
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| End bp | 4303503 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637906581 |
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| Product | export protein FliQ |
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| Protein accession | YP_512137 |
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| Protein GI | 89056686 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAGA TGATCTTCTT CGACACCATG CGCCAAGGGC TTTGGATCTC GGTCGTCGTC
GCGACGCCGA TCCTCGCAGC GGCTCTTGTG TCGGGCATTG TGGTGGGCCT CTTTCAGGCT
CTCACAAGCG TTCAGGAAAT GACGTTGACG TTCGTGCCAA AGCTCGCGGC CATCGTCGTC
GTGTTCTGGG TGTCGATGGG GTTCATGTCA CAAACGCTCG TTTCGTACTT CACCGACACT
CTTGTGCCAA TCATTGCGGG GATGTGA
|
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| Protein sequence | MDEMIFFDTM RQGLWISVVV ATPILAAALV SGIVVGLFQA LTSVQEMTLT FVPKLAAIVV
VFWVSMGFMS QTLVSYFTDT LVPIIAGM
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