Gene Jann_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4193 
SymbolflgG 
ID3936682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4301707 
End bp4302492 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content59% 
IMG OID637906579 
Productflagellar basal body rod protein FlgG 
Protein accessionYP_512135 
Protein GI89056684 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCT TGGATATCGC CGCCACTGGC ATGAGCGCGC AACAGTTGCG CGTCGACGTT 
ATCTCAAACA ATATCGCGAA CATGTCGACG ACGGGCTACA GCCCCCGTCG TGCCGATTTT
GCGGATCTCC ACTATCAACA GATGGTGCGA GCGGGTGCGA TCAATGCCTC CGACGGCACA
GTCGTTCCGG CGGGTGTCCA GATCGGCCTT GGCGTGCGTC CGGCAGCAGT CACCGTGACG
TGGGAGCAAG GGACGCTCGG CGCGACCGGC GGTCAGTTGG ACGTGGCCAT CGAAGGACGC
GGCTATCTTG AGGTGACGCT TCCCAGCGGG GACAATGCGT ATACCCGGGA CGGCGCGTTG
CAGCGCACGG GCGACGGATT GATCGTGACA AATGACGGGT TCGAAGTGAA CCCAGGTATC
ACCATCCCCG ACGATGCCCA GGAAATAACG ATCAACGCCA ATGGAGAGGT CTTCGCGTCT
TTTCGGGGCG AGATTCAACC CCAGCTTCTA GGTCAATTGA ACATGGTGCG TTTCACCAAT
GACAACGGTC TGGAAGCCAT CGGCTCAAAC CTGTTTCTTG AAACTGGTGC CTCCGGTGCT
CCTTTGGCTG GGGATCCCGG TGAGGATGGA ATGGGAACGT TCCGACAGGG ATACGTGGAG
CAATCCTCCG TCGATGCGGT TCGTGAGATC ACGGACCTGA TCGAAGCGCA GCGCGGCTAC
GAGTTGAATG CGAAAGTTCT GACCGCAGCC GATCAGATCC TCGGCGCAAC CACGCAGGTG
CGCTGA
 
Protein sequence
MRALDIAATG MSAQQLRVDV ISNNIANMST TGYSPRRADF ADLHYQQMVR AGAINASDGT 
VVPAGVQIGL GVRPAAVTVT WEQGTLGATG GQLDVAIEGR GYLEVTLPSG DNAYTRDGAL
QRTGDGLIVT NDGFEVNPGI TIPDDAQEIT INANGEVFAS FRGEIQPQLL GQLNMVRFTN
DNGLEAIGSN LFLETGASGA PLAGDPGEDG MGTFRQGYVE QSSVDAVREI TDLIEAQRGY
ELNAKVLTAA DQILGATTQV R