Gene Jann_4184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4184 
Symbol 
ID3936673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4292364 
End bp4293230 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content54% 
IMG OID637906570 
Productflagellar motor protein MotA 
Protein accessionYP_512126 
Protein GI89056675 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGAA TAGTTGGAAT TGCCGTCGTC TTGGTCATGG TCTTTGGCGG CTATGCGTTG 
GCCGGGGGTA AGTTCGGCAT CATCCTAAAG GCACTGCCCT TTGAGTCGAT GATGATCATG
GGCGCCGCTT TGGGGGCCTT TTTGATTTCA AATGACAAAG GCTCCATCAA AGCAACCATC
AGCGCGCTTA TTAAGGTGTT CAAGGGACCC ACATGGAAAG ACTCGGACTA CCGAGATTTA
CTATGTCTGC TGTACGAATT GATCCGACTT CAACGACAGA ACGCAGTCGC CGTCGAAGAG
CACATTGAGA ACCCCGAGGG GTCGGAGATC TTTGGTCGGT ATCCAAAAAT TTTGAAAGAT
CACGAAGCGG TTGAGCTGAT CTGCGACACG ATGCGTTCGG CTGCGATGAA CTACAACGAC
CCGCACCAGG TCGAGGAAGT TCTGGACAAA CGTCTTGAGC AGAACGTCCA CCACCAAATG
CACGGCAGCC ACGCCATGCA GACCGTGGCT GACGGCCTGC CCGCACTTGG TATCGTTGCC
GCCGTGTTGG GTGTGATCAA GACAATGGCC TCAATCGACC AACCGCCCGA GGTTTTGGGC
GGTCTCATTG GCGGTGCCTT GGTGGGGACG TTTCTTGGCG TCTTTCTCGC TTATGGCTTC
GTTGGGCCGT TTGCCGCGAA AATGAAGACG GCGATCGAGG AAGATCATCA ATTCTATCTG
ATGATCCGTG AGGTGTTGAT CGCCAATCTC CACAGCCATG CGACTAATAT CTGTATTGAG
GTCGGACGCC AAAACGCACC GCATCATGTC CGTCCAGATT TTAACGACCT TGAGGAGGCA
CTGCGCGGCC TCAAGCAAGC AGCATGA
 
Protein sequence
MLGIVGIAVV LVMVFGGYAL AGGKFGIILK ALPFESMMIM GAALGAFLIS NDKGSIKATI 
SALIKVFKGP TWKDSDYRDL LCLLYELIRL QRQNAVAVEE HIENPEGSEI FGRYPKILKD
HEAVELICDT MRSAAMNYND PHQVEEVLDK RLEQNVHHQM HGSHAMQTVA DGLPALGIVA
AVLGVIKTMA SIDQPPEVLG GLIGGALVGT FLGVFLAYGF VGPFAAKMKT AIEEDHQFYL
MIREVLIANL HSHATNICIE VGRQNAPHHV RPDFNDLEEA LRGLKQAA